Rhizorhabdus wittichii RW1: Swit_0669 Help Entry Swit_0669         CDS       T00538                                  Name (GenBank) AMP-dependent synthetase and ligase   KO K01895   acetyl-CoA synthetase [EC:6.2.1.1] Organism swi  Rhizorhabdus wittichii RW1 Pathway swi00010   Glycolysis / Gluconeogenesis swi00620   Pyruvate metabolism swi00630   Glyoxylate and dicarboxylate metabolism swi00640   Propanoate metabolism swi00680   Methane metabolism swi00720   Other carbon fixation pathways swi01100   Metabolic pathways swi01110   Biosynthesis of secondary metabolites swi01120   Microbial metabolism in diverse environments swi01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:swi00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     Swit_0669    00620 Pyruvate metabolism     Swit_0669    00630 Glyoxylate and dicarboxylate metabolism     Swit_0669    00640 Propanoate metabolism     Swit_0669   09102 Energy metabolism    00720 Other carbon fixation pathways     Swit_0669    00680 Methane metabolism     Swit_0669  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:swi01004]     Swit_0669 Enzymes [BR:swi01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.1  acetate---CoA ligase      Swit_0669 Lipid biosynthesis proteins [BR:swi01004]  Acyl-CoA ligase   Short/medium chain acyl-CoA ligase    Swit_0669 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C Motif Other DBs NCBI-ProteinID:  ABQ67036 UniProt:  A0A9J9H8S2 LinkDB All DBs Position 725817..727499 Genome browser AA seq 560 aa AA seqDB search MLLNGDRLQAARDFLIRHRTDHDAAVAGFAWPRFEQFNFAFDWFDRIAERSDAIALSIAS PRGLRAWSYRDLSLGSNRVAHFLRRHGIGPGDRLLIALGNRIELWETQLAAMKAGCVMVP CTVMLGAAELRERMARSGARAIVADDSIAERLGTPDKGWIGFNVDAPRPGWIDYGAAYGE PAGFAPDQPTRGTDPLLIYFTSGTTAQPKMVTHSHVSYPVGHLSTLYWIGLKPGDTHLNI SSPGWAKHAWSSFYAPWLAEASILTIDQPAFDARFVLDQIRDRAVDCFCAPPTVWRMLLQ ERIEQWPVRLREAVSAGEPLNPHVVERVREVWGIDVRDGYGQTETTAQIGNTPGQPLVAG AMGRPLPGFRIELDGAADHGEIILHAGDMAAGVMLGLQAEAGSAVLPPSGGIHRTGDIAS AAPDGTLTYIGRADDVFKSSDYRISPFEIESVLLEHPAVAESAVIPSPEPTRLAVPKAII VLAPGHAPSAETAAEIFAHSRARLAPYKRIRRLEFGELPKTVSGKTRRAELREREDGGRS EGEYREEDFATTAKSGSRSG NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt gtgctattgaacggagacaggttgcaggccgcgcgggactttctcatccggcatcgcacc gatcatgacgccgcggtagccggcttcgcctggccgcgcttcgagcagttcaacttcgcc ttcgactggttcgatcggatcgccgagcgcagcgatgcgatcgcgctgtcgatcgccagc ccccgaggcctccgtgcctggtcctaccgcgacctgtccctcggctcgaaccgtgtcgcg catttcctgcgccgccatgggatcggccccggcgatcgactgctgatcgcgctcggcaac cggatcgaactctgggaaacgcagctcgccgcgatgaaggccggctgcgtgatggtgccc tgcacggtgatgctgggggcagccgaactgcgcgagcgcatggcccgcagcggcgcgcgc gcaatcgtcgccgacgacagcatagccgaacgcctgggcacgcccgataagggctggatc ggcttcaacgtcgacgccccccgccccggctggatcgattatggcgcggcttatggcgag ccggccggcttcgcgccggatcagccgacacgcggcaccgatccgctgctgatctacttc acctccggcaccacggcgcagccgaagatggtgacgcacagccatgtttcctatccggtc ggccatctgtcgacgctctactggatcgggctgaaacccggcgatacgcatctcaacatc tcgtcgcctggctgggccaaacatgcctggagcagtttctacgcgccctggctcgccgag gcatcgatcctgacgatcgaccagcccgccttcgacgcgcgcttcgtgctcgatcaaatc cgcgatcgcgcggtggactgtttctgcgcgccgccgacggtgtggcgcatgctgctgcag gagaggatcgagcaatggcccgtccgcctgcgcgaagcggtcagcgccggcgaaccgctg aacccgcatgtggtggagcgcgtccgcgaagtctggggtatcgacgtgcgcgacggctat ggccaaaccgagacgaccgcccagatcggcaatacgccgggccagccgctggtcgccggc gcgatgggccgtccgctgcccggcttccgcatcgaactcgacggcgccgccgaccatggc gagatcatcctgcacgccggggacatggccgcgggggtgatgctcgggctgcaggccgaa gccggcagcgcggtcctgccgccatctggcggtatccaccggaccggcgacatcgcctcc gccgcaccggacggcacgctgacctatatcggccgcgccgacgatgtcttcaaatcgagc gactacaggatcagccccttcgaaatcgagagcgtcctgctggaacatccggcagtagcc gaatccgccgtcatccccagccccgagccaacccgcctggcggtgcccaaggcgatcatc gtcctggcgccgggccatgccccctcggccgaaaccgccgcggagattttcgcacacagt cgcgcccgcctggcgccctataagcggatcaggcgactggaattcggcgagctgccgaag acggtttcgggcaagacgcgtcgcgccgaattgcgcgagcgagaagatggcggccggtcc gagggcgaatatcgggaggaggatttcgccactacagcgaagagcgggtctcgatcaggt tga

Rhizorhabdus wittichii RW1: Swit_0688 Help Entry Swit_0688         CDS       T00538                                  Name (GenBank) acetyl-coenzyme A synthetase   KO K01895   acetyl-CoA synthetase [EC:6.2.1.1] Organism swi  Rhizorhabdus wittichii RW1 Pathway swi00010   Glycolysis / Gluconeogenesis swi00620   Pyruvate metabolism swi00630   Glyoxylate and dicarboxylate metabolism swi00640   Propanoate metabolism swi00680   Methane metabolism swi00720   Other carbon fixation pathways swi01100   Metabolic pathways swi01110   Biosynthesis of secondary metabolites swi01120   Microbial metabolism in diverse environments swi01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:swi00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     Swit_0688    00620 Pyruvate metabolism     Swit_0688    00630 Glyoxylate and dicarboxylate metabolism     Swit_0688    00640 Propanoate metabolism     Swit_0688   09102 Energy metabolism    00720 Other carbon fixation pathways     Swit_0688    00680 Methane metabolism     Swit_0688  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:swi01004]     Swit_0688 Enzymes [BR:swi01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.1  acetate---CoA ligase      Swit_0688 Lipid biosynthesis proteins [BR:swi01004]  Acyl-CoA ligase   Short/medium chain acyl-CoA ligase    Swit_0688 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C ACAS_N Motif Other DBs NCBI-ProteinID:  ABQ67055 UniProt:  A0A9J9LCP9 LinkDB All DBs Position complement(752774..754729) Genome browser AA seq 651 aa AA seqDB search MADHLYPVPASWAAKSRMNAAERAADHALSLAAPGRYWLDRAARLDWFRFPTRADESSFD EADFQVKWFADGALNVSVNCIDRHLAGHGDDVAILWEPDDPAEAPRRFTYAQLHAEVCRL ANVLKAQGVRKGHRVTIYLPMIPEAAFALLACARIGAIHSVVFGGFSPDALAGRIQDCDS SVVVTADHGRRGGKLVPLKANVDEALRQCTSVEAVVVVRATGGAVEMVPGRDVWLDEAVR HVAADCPAEPMNAEDPLFILYTSGSTGKPKGVVHTSGGYLLWASLTHELCFDYRRGEVFW CSADIGWVTGHSYIVYGPLANGATTLIYEGVPNWPDASRMWEVVDRHGVHTLFTAPTALR ALMREGDDYVTGTSRKSLRLLGTVGEPINPEAWRWYHEVVGEGRCPIVDTWWQTETGAAM IAPLPGATALKPGSATLPMPGVAPELVDAEGRPVEGAGEGNLCITRSWPGQMRTVWNDHA RFFQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEVESALVLHAKV AEAAVVGFPHDIKGQGIYAYVTLNAGEEASEDLRKELRDWVRTEIGPIATPDAIQFAPGL PKTRSGKIMRRILRKIAEGDVSPLGDTSTLADPAVVEHLVDNRIIAERPKV NT seq 1956 nt NT seq  +upstreamnt  +downstreamnt atggccgaccatctctatcccgtgcccgccagctgggcggccaagagccggatgaacgcc gccgagcgcgccgccgaccatgccctctcattggccgcgccggggcgctactggctcgac cgcgccgcgcggctcgactggttccgcttcccgaccagggccgacgagagcagcttcgac gaggccgatttccaggtgaagtggttcgccgacggcgcgctcaacgtgtcggtcaactgc atcgaccggcatctggccgggcatggcgacgacgtcgcgatcctctgggaacccgacgat ccggccgaggcgccgcgccgcttcacctatgcccagctccacgccgaagtgtgccgcctc gccaacgtgctgaaggcgcagggcgtgcggaaggggcatcgcgtcaccatctacctgccg atgatcccggaggcggcgttcgcgctgctcgcctgcgcgcggatcggggcgatccattcg gtggtgttcgggggcttctcccccgatgcgctcgccgggcgcatccaggattgcgacagc agcgtcgtcgtcaccgccgaccatggccggcgcggcggcaagctggtgccgctcaaggcc aatgtcgacgaggcgctgaggcaatgcaccagcgtcgaggcggtcgtcgtcgtccgcgcg acgggcggcgcggtggagatggtgccggggcgtgacgtctggttggacgaagccgtccgg catgtggcggcggattgcccggccgagccgatgaacgcggaggacccgctgttcatcctc tatacgagcggctcgaccggcaagccgaagggcgtggtgcacacgagcggcggctatctg ctgtgggcgagcctgacccatgagctgtgtttcgactatcggcgcggtgaggtcttctgg tgctcggccgatatcggctgggtcaccggccacagctatatcgtctacgggccgctcgcc aacggcgcgacgacgctgatctacgaaggcgtgcccaattggcccgatgcgagccggatg tgggaggtggtcgaccggcacggcgtccacaccctgttcaccgcgccgaccgcgctccgc gcgctgatgcgcgaaggtgatgattacgtcaccggaacctcgcgcaaatccttgagattg ctcggcacggtcggcgaaccgatcaatccggaggcgtggcgctggtatcacgaggtggtc ggcgaggggcgctgcccgatcgtcgacacctggtggcagaccgagacgggcgcggcgatg atcgcgccgctgccgggcgcgacggcgctgaagccgggcagcgccaccctgccgatgccg ggcgtcgcgcccgaactggtcgatgccgaggggcgcccggtcgaaggagcgggcgagggc aatctgtgcatcacgcggagctggccggggcagatgcgcaccgtgtggaacgatcatgcc cgcttcttccagacctatttctcgacctacaagggcaaatatttcaccggcgacggctgc cgccgcgacgaggacggctattactggatcaccgggcgcgtcgacgacgtgatcaacgtc tcgggccaccgcatgggcaccgccgaggtggaaagcgcgctggtgctccacgccaaggtg gccgaggcggcggtggtcggcttcccgcacgacatcaagggccagggcatctacgcctat gtcaccctgaacgcgggcgaggaggcaagcgaagacctgcgcaaggaactgcgcgactgg gtgcggaccgagatcgggccgatcgcgacccccgacgcgatccagttcgcgccggggctg cccaagacccgctcgggcaagatcatgcgccgcatcctccgcaagatcgccgagggcgac gtctccccgctcggcgacacctccaccctcgccgatccggcggtggtggagcacctcgtc gacaaccggatcatcgccgagcgacccaaggtataa

Rhizorhabdus wittichii RW1: Swit_3479 Help Entry Swit_3479         CDS       T00538                                  Name (GenBank) acetyl-coenzyme A synthetase   KO K01895   acetyl-CoA synthetase [EC:6.2.1.1] Organism swi  Rhizorhabdus wittichii RW1 Pathway swi00010   Glycolysis / Gluconeogenesis swi00620   Pyruvate metabolism swi00630   Glyoxylate and dicarboxylate metabolism swi00640   Propanoate metabolism swi00680   Methane metabolism swi00720   Other carbon fixation pathways swi01100   Metabolic pathways swi01110   Biosynthesis of secondary metabolites swi01120   Microbial metabolism in diverse environments swi01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:swi00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     Swit_3479    00620 Pyruvate metabolism     Swit_3479    00630 Glyoxylate and dicarboxylate metabolism     Swit_3479    00640 Propanoate metabolism     Swit_3479   09102 Energy metabolism    00720 Other carbon fixation pathways     Swit_3479    00680 Methane metabolism     Swit_3479  09180 Brite Hierarchies   09181 Protein families: metabolism    01004 Lipid biosynthesis proteins [BR:swi01004]     Swit_3479 Enzymes [BR:swi01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.1  acetate---CoA ligase      Swit_3479 Lipid biosynthesis proteins [BR:swi01004]  Acyl-CoA ligase   Short/medium chain acyl-CoA ligase    Swit_3479 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C ACAS_N Motif Other DBs NCBI-ProteinID:  ABQ69825 UniProt:  A0A9J9HDQ0 LinkDB All DBs Position complement(3823596..3825533) Genome browser AA seq 645 aa AA seqDB search MTDLYPVPAEWAARAKVKDADYKALYARSIDDAHAFWLEQAKRLDWVRFPTRTNESSFDE ADFGVKWFADGQINVAANCLDRHLAERGDQVAIIWEPDAPTDAPRRFTYRQVHEEVCRFA NVLKAQGVKKGDRVTVYLPMIPEAAFALLACARIGAIHSVVFGGFSPEALAGRIQDCDSS IVITADCGRRGGKLVPLKTNVDAAAQHAPSLTSVIVIRATGAEVPMQAGRDVWYDEAAQG VSADCPAETMDAEDPLFVLYTSGSTGKPKGVLHTTGGYLLWASLTHELCFDYRPGQIYWC AADIGWVTGHSYIVYGPLANGGTTLMYEGVPNWPDASRIWQVVDRHQVEIVFTAPTALRA LMRDGDEFVARTSRKSLKLLGTVGEPINPEAWRWYHEVVGEGRCPIVDTWWQTETGAAMI APLPGATDLKPGSATRPLFGVVPELVDADGQVLEGATDGNLCITRSWPGQMRTVWGDHAR FFQTYFSTYKGKYFTGDGCRRDEDGYYWITGRVDDVINVSGHRMGTAEVESALVLHAKVA EAAVVGFPHDIKGQGIYAYVTLNAGEEASEALRKELRDWVRTEIGPIATPDAIQFAPGLP KTRSGKIMRRILRKIAEGDVSSLGDTSTLADPAVVDDLVANRIKS NT seq 1938 nt NT seq  +upstreamnt  +downstreamnt atgaccgatctttatcccgttcccgccgaatgggccgccagggcgaaggtgaaggatgcc gactacaaggcgctctacgcccgatcgatcgacgacgcccacgccttctggctggagcag gcgaagcggctcgactgggtgcgctttccgaccaggaccaacgagagcagcttcgacgag gccgatttcggggtgaagtggttcgccgacgggcagatcaacgtcgcggccaactgcctc gaccgccatctcgccgagcgcggcgaccaggtggcgatcatctgggaacccgacgcgccg accgacgcgccgcggcgcttcacctacaggcaggtgcacgaggaggtctgccgcttcgcc aatgtgctgaaggcgcagggggtgaagaagggcgaccgcgtcaccgtctacctgccgatg atccccgaggcggcgttcgcgctgctcgcctgcgcgcggatcggggcgatccattcggtg gtgttcggcggcttctcgcccgaggcgctggcgggccgcatccaggattgcgacagctcg atcgtgatcaccgccgattgcgggcggcgcggcggcaagctggtgccgctcaagacaaac gtcgacgcggccgcgcagcatgcgccgagcctgacgtcggtgatcgtgatccgcgcgacc ggcgccgaggtgccgatgcaggccgggcgcgacgtctggtacgacgaggcggcgcagggc gtgtcggccgactgcccggcggagacgatggacgcggaggacccgctgttcgtgctctac accagcggatcgacgggcaagcccaagggggtgctccacacgacgggcggctatctgctc tgggcgagcctgacccatgagctgtgcttcgactatcggccgggacagatatactggtgc gcggcggacatcggctgggtcaccgggcacagctatatcgtctatgggccgctcgccaat ggcggcacgacgctgatgtatgagggcgtgcccaactggcccgacgcgagccgcatctgg caggtggtcgaccgccaccaggtcgagatcgtcttcaccgcgccgaccgcgctgcgcgcg ctgatgcgcgacggcgacgagttcgtggcgcggacctcgcgcaaatcgctcaagctgctc gggacggtcggcgagccgatcaacccggaggcgtggcgctggtatcacgaggtggtcggc gagggacgctgcccgatcgtcgacacctggtggcagaccgagacgggcgcggcgatgatc gcgccgctgccgggcgcgaccgacctcaagcccggcagcgcgacgcggccgctgttcggg gtggtgcccgagctggtcgacgccgacggccaggtgctggagggcgcgaccgacggcaat ctgtgcatcacgcgcagctggccggggcagatgcggacggtctggggcgaccatgcgcgc ttcttccagacctatttctcgacctacaagggcaagtatttcaccggcgacggctgccgc cgcgacgaggacggctattactggatcaccgggcgcgtcgacgacgtgatcaacgtctcg ggccaccgcatgggcacggccgaggtcgagagcgcgctggtgctccacgccaaggtcgcc gaggcggcggtggtcggcttcccgcacgacatcaagggccagggcatctacgcctatgtg acgctgaacgcgggcgaggaggcgagcgaggcgctacgcaaggaactgcgcgactgggtg cggaccgaaatcgggccgatcgcgacgcccgacgcgatccagttcgcgccggggctgccc aagacccgctcgggcaagatcatgcgccgcatcctgcgcaagatcgccgagggcgacgtc tcctcgctcggcgacacctccaccctcgccgatccggcggtggtcgacgatctggttgcg aaccggatcaaaagctga

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