Rhizorhabdus wittichii RW1: Swit_0725
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Entry
Swit_0725 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0725
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ67092
UniProt:
A0A9J9H912
LinkDB
All DBs
Position
complement(802131..804503)
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AA seq
790 aa
AA seq
DB search
MKRGIGILSASAATLAVFAPGAGHAQDAAGPVVASGLEEITVTARRRAENIQSAPLSVSA
FSSAALEERNVQSSSDITSFVPNVQFDSAASESGGGASSQISIRGIGQTDYVLTVEPAVG
VYLDGVYIGKSMGSLLDAVDIDRLEVLRGPQGTLFGKNTIGGAIQLISKRPTDTLEGYGE
LTSGSYSRFDAKGAISGPLSDTVRARLSGAYQSRHGFVKRVTETGQDTGDRQGNVDRLSG
RLAIEADLTSSLTATLTFDGTRIREQSPGQILVKADEGAAFSGAYNAGVPGGVCLPGAGA
SRFANPYCYNSQWVRPLKSLETTNSGPNYADTDVYGAGLNLEWKLGGATLKSITAWRKVK
VDIAQDITGSPHYLNFIEQHIKTEQFSQEFQLLGDLADDKLHYVLGLYYLHESGTQLFPV
QLTLVQFLSGGKIRNDSYAGFGQVTYDLTDQFSITGGLRYSDETRRFNPGVQVLQGYAAQ
TDVPGFVNLFAGAVGPAGTPLFPAGWYSRGSKSTTPMVSANYKFNRDVMAYASFSKGFKG
GGFTMRYFPPVIPAPGTDPNDIVSYAGPEKATSYEVGLKTELFDRRLRFNVAAFYTDYKD
IQVTYNIDPDGPGPIGNFVPVLANAASAKIKGVEVEASARLADWLRLDGSLGYTDADYKG
FSAQALANYPTAGSFRVPNTPKWTANIGGTATLFDSDDKGTALVRVDYAYRSSQFKEFSN
DPTLFQKGFGLLNASLTYKLPGDHIELSAGATNITDKTYIVSGVSNTGIGYTQATVSRPR
EWFVRAKYRL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggggaattgggatattgtcggcttcggccgccacgctggccgtgttcgcgccg
ggtgccggccatgcgcaggacgcggcggggcccgtcgtcgccagcggcctcgaggagatc
accgtcaccgcccgccggcgcgcggagaatatccagtcggcgccgctctcggtctccgcg
ttcagcagcgccgcgctcgaggagcgcaacgtccagagctcgtccgacatcaccagcttc
gtgccgaacgtgcagttcgacagcgcggcgagcgagtccggcggcggcgcgtcgagccag
atctcgatccgcggcatcggccagaccgactatgtgctgaccgtcgagccggcggtcggc
gtctatctggacggcgtctatatcggcaagtcgatgggctcgctgctcgacgcggtcgac
atcgatcggctggaggtgctgcgcggcccgcaggggacgctgttcggcaagaacacgatc
ggcggcgcgatccagctcatctcgaagcggccgaccgacacgctcgaaggctatggcgag
ctgaccagcggcagctacagccgcttcgacgccaagggcgcgatctcgggcccgctcagc
gacaccgtccgcgcgcgcctgtcgggcgcctatcagagccgccacggcttcgtgaagcgc
gtcaccgagaccggccaggacaccggcgaccggcagggcaatgtcgaccggctgagcggc
cgcctcgcgatcgaggccgacctgacctccagcctcaccgcgacgctgaccttcgacggc
acccgcatccgcgagcagtcgccgggccagatactggtcaaggccgacgaaggcgcggcc
ttctcgggcgcctataatgccggcgtgcccggcggcgtctgcctgccgggggccggcgcc
agccggttcgccaacccctattgctacaacagccagtgggtccgcccgctcaagtcgctg
gagaccaccaacagcggccccaactatgccgacaccgacgtctatggcgcggggctgaac
ctcgaatggaagctcggcggcgcgacgctcaagtcgatcaccgcctggcgcaaggtgaag
gtcgacatcgcgcaggacatcaccggctcgccgcactatctcaacttcatcgagcagcac
atcaagaccgagcagttcagccaggagttccagctcctcggcgatctcgccgacgacaag
ctgcactatgtgctcggcctctattacctgcacgagagcggcacccagctcttcccggtg
cagctcacgctcgtccagttcctgtcgggcggcaagatccgcaacgacagctatgcgggc
ttcggccaggtcacctatgacctgaccgaccagttctcgatcaccggcggcctgcgctat
tcggacgagacgcggcgcttcaatccgggcgtgcaggtgctccagggctatgccgcgcag
accgacgtgccgggcttcgtcaacctgttcgccggcgcggtcggcccggccggcacgccg
ctcttcccggccggctggtattcgcgcgggtcgaagtcgacgacgccgatggtctcggcc
aactacaagttcaaccgcgacgtcatggcctatgcgagcttctcgaagggcttcaagggc
ggcggcttcacgatgcgctacttcccgcccgtcatcccggcgccgggcaccgacccgaac
gacatcgtctcctatgccggcccggaaaaggcgacctcctacgaggtcggcctgaagacc
gagctgttcgatcgccgcctgcgcttcaacgtcgcggccttctacaccgactacaaggac
atccaggtcacctacaacatcgacccggacggccccggcccgatcggcaatttcgtgccg
gtgctcgccaacgccgcctcggcgaagatcaagggcgtcgaggtcgaggcgtcggcccgg
ctcgccgactggctgcggctcgacggcagcctcggctataccgatgccgactataagggc
ttctcggcccaggcgctggccaactatccgacggcgggcagcttccgggtgccgaacacg
cccaaatggacggcgaacatcggcggcaccgcgacgctgttcgacagcgacgacaagggc
accgcgctggtccgcgtcgactatgcgtaccgcagcagccagttcaaggagttcagcaac
gatccgacgctgttccagaagggcttcggactgctcaacgccagcctgacctacaagctg
ccgggcgaccatatcgagctgtcggccggcgccaccaacatcaccgacaagacctatatc
gtcagcggcgtctccaacaccggcatcggctatacccaggcgaccgtctcgcggccgcgc
gaatggttcgtccgcgccaaatatcgcctctga
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