Rhizorhabdus wittichii RW1: Swit_0838
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Entry
Swit_0838 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0838
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
PorP_SprF
Motif
Other DBs
NCBI-ProteinID:
ABQ67205
UniProt:
A0A9J9LCV0
LinkDB
All DBs
Position
complement(934091..936445)
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AA seq
784 aa
AA seq
DB search
MANSTIARLLAASCLTVVASQGLTTPLHAAEASSGVADDPAEIIVTANKREESARTVPMS
LTIASGDKLLSAGVRSPEDLVKIVPGLTVQPSPFNTPVYTMRGIGFYETSLSAAPTVAVY
VDEVPLPFSATTKLAVLDLQRVEVLKGPQGTLFGQNTTGGAINYIAAQPTSTLAAGADLT
LSRFSTYDAQGFVSGPLSDKVSARVAARVVQGGAWQKSITRNDDLGKVKQLQGRAIVTWD
AGPDFTVRAMVSAWQDRGDTQAPQLLVDSCGASTAGTCGNPEAAAFRAYPRPPHDNRSAD
WGAGVYGRANKRDDSFVQGSLRLEKGLTDNLKLISITSYSRYKTDSVQDFDGTMLNSADN
NTTGYIHAFSQELRLNADFDKVRITSGLNYDRFNVYDRIFYNIGQSVSADPLYFVPGHLL
PEYTYSFTHQISKTYAAFLNGEVQLSDRVKVTAGARYTNVKRSFSGCSFVLGVTADWFNQ
IFGTSLVDGQCSVFTPNFPQTYDPLLFDKLNEDNLSWNAVVDYKLSDKAMVYGRIAKGYK
AGSFPTASVVSYTGLLPVHQESVLTYELGLKASLPDRLGELTIAGFYNDYKNKQLRSRKP
DPLFGTLDGLVQIPSSWSKGIEASLTLRPVEGLTLSAGGTYLETRVTKYDGFDAFGTPTN
FKGQRFPYAPKWSLVGDAEYRFPLGTGHEGYAGVSAVYNSATSSVLSNRDTAFTAADTRQ
VIKAYTLIDVRAGVSFGENKVKVGAFVRNLTNKYYWTNVLDSLSSIVRFTGMPRTYGLQA
SWRY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccaattccaccattgcccggctgcttgcggccagttgcctgacggtcgtcgcgagc
caggggctgaccaccccgctccacgcggccgaagcgtcgtccggggtcgcggacgacccg
gccgagatcatcgtcaccgccaacaagcgcgaggaaagcgcgcggaccgtgccgatgtcg
ctgaccatcgccagcggcgacaagctgctcagcgccggcgtccgctcgcccgaggacctg
gtgaagatcgtgcccggcctcaccgtccagccgtcgccgttcaacacgccggtctacacg
atgcgcggcatcggcttctacgagaccagcctgtcggccgcgcccaccgtcgcggtctat
gtcgacgaggtgccgctaccgttcagcgcgacgaccaagctcgcggtgctcgacctccag
cgggtcgaggtgctcaaggggccgcaggggacgctgttcggccagaacacgaccggcggc
gcgatcaactatatcgccgcgcagccgacctccacgctcgcggcgggcgccgatctcacg
ctgtcgcgtttctccacctatgacgcgcagggtttcgtcagcggcccgctgagcgacaag
gtctcggcccgcgtcgcggcgcgcgtcgtccagggcggcgcctggcagaagagcatcacc
cgcaacgacgatctcggcaaggtcaagcagctccagggccgcgccatcgtcacctgggac
gccgggcccgacttcaccgtccgcgcgatggtgagcgcctggcaggaccggggcgacacc
caggcgccccagctgctggtcgacagctgcggggcgtcgaccgccggcacctgcggcaac
ccggaggccgcggcgttccgcgcctatccgcgaccgccgcacgacaatcgctcggccgac
tggggggcgggcgtctacggccgcgcgaacaagcgcgacgacagcttcgtccagggatcg
ctgcgcctcgaaaaggggctgaccgacaatctcaagctgatctcgatcacctcctactcg
cgctacaagaccgattcggtgcaggacttcgacggcaccatgctcaactcggccgacaac
aacacgaccggctatatccacgccttctcgcaggagctgcggctcaacgccgacttcgac
aaggtccggatcacctcgggcctcaactatgaccggttcaacgtctacgaccggatcttc
tacaatatcggccagtcggtctcggccgacccgctctatttcgtgcccggccatctgctg
cccgaatatacctacagcttcacccatcagatctcgaagacctatgccgccttcctcaac
ggcgaggtccagctctccgaccgggtgaaggtgaccgccggcgcgcgctataccaatgtg
aagcgttcgttcagcggctgctccttcgtgctcggcgtcaccgccgactggttcaaccag
atcttcgggaccagcctcgtcgacgggcaatgctcggtgttcacgccgaacttcccgcag
acctacgatccgctgctgttcgacaagctcaacgaggacaatctctcgtggaacgcggtc
gtcgactataagctcagcgacaaggcgatggtctatggccgcatcgccaagggctacaag
gcgggcagcttcccgaccgcttcggtggtcagctataccggcctgctgccggtccaccag
gaatcggtgctcacctacgaactgggcctcaaggcgtcgctgcccgaccggctcggcgag
ctgacgatcgcgggcttctacaacgactacaagaacaagcagctccgcagccgcaagccc
gatccgctgttcggcacgctcgacggcctggtccagatcccgagcagctggagcaagggc
atcgaggcgtcgctgaccctgcgtccggtcgaggggctgacgctcagcgcgggcggcacc
tatctcgaaacgcgggtgaccaaatatgacggtttcgacgccttcgggacgccgaccaac
ttcaaggggcagcgcttcccctatgcgcccaaatggtcgctggtcggcgatgccgaatat
cgcttcccgctcggcaccgggcatgaaggctatgccggcgtctcggcggtctacaacagc
gcgacctcctcggtgctgtcgaaccgcgacaccgccttcaccgccgccgatacgcgacag
gtgatcaaggcctatacgctgatcgacgtgcgcgcgggcgtctccttcggcgagaacaag
gtgaaggtcggcgccttcgtccgcaacctcaccaacaaatattactggaccaacgttctc
gacagcctgtcgtcgatcgtccgcttcaccggcatgccccggacctacgggctgcaggcg
agctggcgctactga
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