Rhizorhabdus wittichii RW1: Swit_0853
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Entry
Swit_0853 CDS
T00538
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0853
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
Motif
Other DBs
NCBI-ProteinID:
ABQ67220
UniProt:
A0A9J9LCV6
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All DBs
Position
complement(947892..949013)
Genome browser
AA seq
373 aa
AA seq
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MRKLAILAALASTALAAPSFARDNAWYVGVEGGGLLQEDMKFDVGPSTLSPGGRATVDSK
TGFDVDGIVGYDFGMFRLEGEVGYKRDRVNSFTTSASRTPAAVGGAGAPAGTYPDASGKN
SALSFMVNGLLDFGGEEGFSGYIGGGAGIARVKFAGYNVSGDDFLNDSDSKFAWQAIAGV
RYPVSTNVDVGLKYRYFNVKDAKVFDRLGAEYEGTWRSHSLLLSLVYNFGEPAAPPPPPP
PPPPPPPPPPPPPPPPPVVETPGPFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQ
LAGHADKSGSDQYNVGLSQRRADAVKAYLAGKGVPDSAITTEAFGESRPLVDTADGVREP
QNRRVEITFGAGM
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagcttgccatcctggcggccctagcatctaccgcgctcgcagcgccgtccttt
gctcgtgacaacgcctggtacgttggtgtcgaaggcggtggtctgttgcaggaggacatg
aagttcgacgtcggtccgtcgacgctgtcgccgggcggccgtgcaacggtcgactccaag
accggtttcgacgtcgacggcatcgtcggctatgatttcggcatgttccgccttgaaggc
gaagtcggttacaagcgtgaccgcgtgaacagcttcacgaccagcgcgtcgcgcaccccc
gccgccgtcggtggcgccggtgctccggccgggacctatccggacgcttcgggcaagaac
agcgccctcagcttcatggtcaacggcctgctcgacttcggtggcgaggaaggcttctcg
ggttacatcggcggtggtgccggtatcgcccgcgtcaagttcgccggctacaacgtgtcg
ggcgacgacttcctgaatgactcggactcgaagttcgcctggcaggcgatcgccggcgtc
cgttatccggtgtcgaccaacgtcgacgtcggcctgaagtatcgctacttcaacgtcaag
gacgcgaaggtattcgaccgcctcggcgccgaatatgagggcacgtggcgttcgcacagc
ctgctgctgagcctcgtctacaacttcggtgagccggctgctccgccgccgccgcctccg
cccccgccgccgcctcctccgcccccgccgcctccgccgccgcctccgccggtggtcgag
actccgggtccgttcatcgtgttcttcgactgggataagtcggacatcacggcggaagcc
gcgtcgatcctcgacaatgcggccaatgcctatgcgacgaccggccaggcgcgggtccag
cttgccggccacgccgacaagtcgggtagcgaccagtacaatgtcggcctctcgcagcgt
cgtgccgacgcggtgaaggcttacctcgctggcaagggcgtgccggactcggcgatcacg
accgaagcgttcggtgagagccgtccgctcgtcgacaccgccgatggcgtccgcgagccg
cagaaccgtcgcgtcgaaatcaccttcggcgccggcatgtaa
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