Rhizorhabdus wittichii RW1: Swit_0899
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Entry
Swit_0899 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0899
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ67266
UniProt:
A0A9J9LDQ4
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All DBs
Position
complement(989579..991873)
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AA seq
764 aa
AA seq
DB search
MNYAHRSVGAVIAMASLVGVAAHAKGVGAKEEGYGTAAVETLEADAGDAIVVTAQRRVQK
LQDVGIAVSAFSGEQLRTRQISSSIDVARMTPGVFASSSNGGQTASISIRGVTQNDSSDA
VEGPVAVYVDETYVPSLQGQGFGLFDIERVEALKGPQGTLFGRNATGGLVNFVIAKPSDT
VTGYANGSYGSFDSVKLEGAIGGPIAETVQGRISLLYNRNNGWLKNLYPGKPDVGGEDTL
GGRAQLQWQATDALKVRATASAVRSDLSTGAYNSISTQPVFDGQGRVVGADRVSGPTALG
FTPLPGSRLEVNHDFACSDCGRTRLYDAALHVDYDAGGAQISAITNWKRITKALLIDVDS
SPVNLVDVGQNAQTESFSQELRATGKADRAVWNLGVYYLQIHTLAQMGFLARPNGILAGA
LGVSGTGADLANLQDLWTRSFSGFGQIEYKLAPRLSGTIGLRVIHEWQRYDFQSSQFQNQ
NDYKLDTAIAVATLQPSYANKRSDSFWAGKAALEYHANRDMLLYASINRGAKGGNYNSKL
PDGSPPLSPDEFAYKGETLLAYEGGMKSTWLDGKATFNLLGFIYDYSNYQAFTFSNASGF
VQNRDANLYGGEAEFTLRPVEGLELSGGLSLLHAKVKNVQVATGVYKDVRPTFAPKRQAN
GRISYRPPLEVAGGHINLAVDGYSTSSFYQNIRNFAAHKISGHTIFGAQVGWESASGFSL
TGAVSNLFDKRYEITGFDLSTLCGCSEVAYGKPRWWTISAGFRF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaactatgcgcaccgctcggtaggggcggttatcgcgatggcgtcccttgtcggggtg
gccgcccatgccaagggcgtcggggcgaaagaagagggatatggtacggccgccgtcgaa
accctcgaagccgatgcgggagatgccatcgtcgtcaccgcgcagcgccgcgtgcagaaa
ttgcaggatgtcggcatcgcggtaagcgcattcagcggcgagcagttgcgtacccgccag
atctccagcagcatcgacgtcgcacggatgacgcccggcgtcttcgcttcgtcctcgaac
ggtgggcaaaccgccagcatttccattcgcggcgtgacccagaacgacagctcggacgcc
gtcgagggtcccgttgccgtctatgtggacgaaacctacgtccccagcctgcagggccag
ggcttcggtctcttcgacatcgagcgcgtcgaggctctcaaggggccgcagggcacgttg
ttcggccgcaatgccacgggcgggctcgtcaacttcgtgatcgccaaaccgtccgacacg
gtgacgggctacgcgaacggcagctatgggagcttcgacagcgtcaagctggaaggcgcg
atcggcgggccgatcgccgaaacggtccaggggcgcatttcgcttctctacaatcgcaac
aatggctggttgaagaacctgtatccgggaaagccggacgtcggcggagaggatacattg
ggcggccgcgcccagctgcaatggcaagcgacggacgcgctcaaggtgcgggcgaccgct
tccgccgtgcggagcgatctgtccaccggcgcctataactccatttcgacgcagcccgtg
ttcgacggtcagggacgcgtggtcggtgcggacagggtctccgggccgacggcgctgggc
tttacgccgcttcccggcagcaggctggaggtcaaccacgacttcgcctgttccgattgt
ggccgcacgaggctttatgacgcggcgctccacgtcgattacgatgccgggggcgcccag
atcagcgcgatcaccaactggaagcgcatcaccaaggccctgctgatcgacgtggacagt
tcgcccgtcaatttggtggacgtgggccagaacgcccagacggagagcttctcgcaggag
cttcgcgccaccgggaaggccgacagggccgtctggaacctcggcgtctattatctgcag
atacacacgctcgcccagatgggctttctcgcccgacccaatggcatactggcgggcgcg
ctgggtgtttccggcaccggcgctgatctcgccaatctccaggacctctggacgcggtca
ttctccggtttcgggcagatcgaatataagctcgcgcccagactgagcggcacgatcggc
ctccgcgtcattcacgaatggcagcgctacgatttccaatcgagccagttccagaaccag
aatgactacaagctggataccgccatcgcggtggccacgcttcagccttcctatgcgaac
aagcggagcgatagtttctgggcgggcaaggccgcgctcgaatatcatgccaatcgcgac
atgctgttgtacgcctcgatcaatcgcggggcgaagggcggcaactacaactccaaattg
cccgatggaagtccgccgctctcgccggacgagttcgcctacaagggcgaaacgctgctc
gcttatgagggcggcatgaagtcgacgtggctggatggaaaggccacgttcaacctgttg
gggttcatctacgattattccaattaccaggccttcaccttttccaacgcctccggcttc
gtgcagaacagggatgcgaacctctatggcggcgaggccgagttcacccttcggccggtc
gagggcctggaactgagcggcggcctctcgctgctgcatgccaaggtcaagaacgtgcag
gtcgcgaccggtgtctataaagacgtgcggccgacattcgccccgaagcggcaggccaac
gggcgcatcagctatcgtcctcccctggaggtcgccggcggccacatcaacctggccgtc
gatggctattcgacatcgtccttctaccagaacatccgcaatttcgcggcgcacaagatc
agcggccacacgatcttcggtgcgcaggtcggatgggagagcgcgtcgggcttctcgctg
accggcgccgtatccaacctgttcgacaagcgatacgagatcacgggcttcgatctgtcg
acgctttgcggctgcagcgaggttgcctacggcaagccgcgctggtggacgatttccgcg
ggatttcgcttctga
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