Rhizorhabdus wittichii RW1: Swit_0989
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Entry
Swit_0989 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_0989
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_0989
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
ABQ67356
UniProt:
A0A9J9LDT9
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Position
1098719..1101061
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AA seq
780 aa
AA seq
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MKPFLTSGASDRALGLALAGAALLAAAPAVAQEASGSSDTIEEIVVTAQKRNENMQSTPI
AISAFTADAISRKGLSDIQQVSRLAPNVSFDFTSPISGASNAASVFIRGIGQQDFALTTD
PGVGTYVDGVYVSRSVGGVLDVLDIERMEILRGPQGTLFGRNTIGGAISIISKMPEKEFG
GSLEASLGNYGRRYLRGSVSLPLGPDTAVRISVSSKDKNGFVKSAYTPQQKSLLGGTPLT
DLGNENRQAARMVLVHDFSDRFKATLSGDYSRLRENNAADRLAGITGTLADGPLVFAYNT
FGSTPSVIPVIGNDRYVPANYITGRDRTYSTGPNGSSIDAWGTALTLDFEASESLSIKSI
TAYRKTTGSFNRDADGSPLVITETSNYGYRHKQFTQELQAVGDVADGAVKYAAGLFYFDE
KGSDPLVVRLPEVVGTIYQDIADVRNKSYAAYAQATWTIVDGLSLTAGGRYTKDRKRFVS
DQYIVTGSASPFLFGGAPAGTLIPLVPRNSVTTQSFEKFSPRASVDYRIGDVLVYGSYSK
GFKSGGFNLRYVAPRPSVLSFGPENATTFEVGTKIDAFDRKLRLNLAAFTTDYKGIQVTV
FENLGAPVTLNAGDARIKGFEAELTAIPLPGLELTANLGYLDSHYTAIRANPALVSTPEQ
IISRSTRLPKAPEWQGTISAAYTYTLGNDARLDARADFHFSSRYANDAVNSRFLNQKAYQ
TLGLSAGYTAPDRRWSLRLFVDNLTDERYIVSGDSNYGIGFHEANYNRPREWGATLGFNF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagccattcctcacatcgggtgcgagcgatcgggcgctcggcctcgcgctggctggc
gcggcgctgctcgcggcggccccggccgtcgcgcaggaggcatccggcagttcggacacg
attgaagagatcgtcgtcactgcccagaaaagaaacgagaatatgcagtcgacgccgatc
gcgatctcggccttcaccgccgacgcgatcagccgcaaggggctgtccgacatccagcag
gtgtcgcgcctcgcgcccaacgtctcgttcgacttcacctccccgatcagcggcgcgtcc
aacgcggcgtcggtgttcatccgcggcatcggccagcaggatttcgcgctgaccaccgat
cccggcgtcggcacctatgtcgacggcgtctatgtctcccgatcggtcggcggcgtgctc
gacgtgctcgacatcgagcggatggagatcctccgcgggccgcaggggacgctgttcggc
cgcaacacgatcggcggcgccatctcgatcatctcgaagatgccggagaaggaattcggc
ggctcgctcgaagcctcgctcggcaattatggccgccgctatctgcgcggttcggtcagc
ctgccgctcggccccgacacggcggtccgtatctcggtttcctccaaggataagaacggt
ttcgtcaagtctgcttatacaccacagcagaagtcgctgctcggcggaacgccgctgacc
gacctcggcaacgagaaccggcaggccgcgcggatggtgctggtccatgatttttcggac
cggttcaaggcgaccctgtcgggcgactatagccgcctgcgcgagaacaacgccgccgac
cggctcgccgggatcaccggcacgctggcggacgggccgctggtcttcgcctacaacacg
ttcgggtcgacgccctcggtcatcccggtgatcggcaacgaccgctacgtcccggccaac
tacatcaccggccgcgaccggacctattcgaccggcccgaacggcagcagcatcgacgcc
tggggcaccgcgctgacgctcgacttcgaggcgagcgagagcctgtcgatcaagtcgatc
accgcctatcgcaagaccaccggatcgttcaaccgcgacgccgacggatcgccgctggtg
atcaccgaaacctccaactacggctatcgccacaagcagttcacccaggaattgcaggcg
gtcggcgacgtcgccgacggcgcggtcaaatatgccgccggcctgttctatttcgacgag
aagggatcggacccgctggtcgtccgcctgcccgaggtggtcggcaccatctaccaggac
atcgccgacgtccggaacaagagctacgccgcctatgcccaggcgacctggacgatcgtc
gacggcctgtcgctgaccgccggcgggcgctacaccaaggacaggaagcgcttcgtctcc
gaccagtatatcgtcaccggatcggcctcgcccttcctgttcggcggcgcgccggccggc
acgctgatcccgctcgtgccccgcaactcggtcaccacccagtcgttcgagaaattctcg
ccgcgcgcgagcgtcgactatcggatcggcgacgtgctggtctacggctcctacagcaag
ggcttcaagagcggcggcttcaacctgcgctacgtcgcgccgcgcccgtcggtgctgtcc
ttcggcccggaaaacgccaccaccttcgaggtcggcaccaagatcgacgcgttcgaccgc
aagctccgcctcaacctcgccgccttcaccaccgactataagggcatccaggtcaccgtg
ttcgagaatctcggcgcgccggtgacgctcaacgccggcgacgcgcggatcaaggggttc
gaggcggaactgaccgccatccccctccccggcctcgagctcaccgccaatctcggctat
ctcgacagccactacactgcgatccgcgccaatccggcgctggtcagcacgcccgagcag
atcatcagccgctcgacccgcctgcccaaggcgcccgaatggcaggggacgatcagcgcc
gcctacacctacacgctgggcaacgacgccaggctcgacgcgcgggcggacttccacttc
tcgtcgcgctacgccaacgacgcggtcaactcgcgcttcctcaaccagaaggcctatcag
acgctcggcctgtcggcgggctacaccgcgcccgaccgccgctggtcgctgcgcctgttc
gtcgacaacctcaccgacgagcgctacatcgtctcgggcgacagcaattacggcatcggc
ttccacgaagccaactacaaccgcccccgcgaatggggcgcgacgctgggcttcaacttc
tga
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