Rhizorhabdus wittichii RW1: Swit_1063
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Entry
Swit_1063 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_1063
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_1063
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ67429
UniProt:
A0A9J9LCU7
LinkDB
All DBs
Position
complement(1183380..1185722)
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AA seq
780 aa
AA seq
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MKEFLRGATRVLGTATIAFLTSTSATALAQTATPPTAPDQAGDRQGQAAGLEDIVVTARR
VKESLQETPVAVTAFSAAAIDRKFATDIRALAGDVPNVVITNVPGFNAASIGIRGQSTGD
IILTFEPAVGVVVDDFVLAHVQTQLFDLFDIDRIEVLRGPQGTLFGKNTVGGVVNVITKR
PEKDFGGELRLGYSSFRTKDVKAAINIPLSDNLFFRAAGSFQESDGYYRLTKTNNVDFIP
VDVPARGQRWGGTRYFSGRAKLLWEPGPDTNVLLTYEMLRDRGDSPPSVNETPKGFLFDV
VGFPGIQTTGGSPFDTGTTLCRGDINAATCPGTLLGHRIDVDGGYLRVEHSFPDVGALTV
VGGYRRVKSILPSDYTGESAYLFVSTRDDVREQYSVEARFSSDFSDRIKFTAGTMYWGQT
LDAKATSFLGFLRFLGDPTALTDPNQSTANYKVDSYAAFGEAEYKVSDPFALFLGGRYTK
EKKSFSVRPQVRRSTIATGFWPEYSDSASFSKPTFRAGYRWQIADGINNYFTYSQGYKSG
GYNEQAMSATSALPFKEETADSFELGLKTETADRRLRFNAAAFYVRYDDLQRDAVVPFVD
PITGLPGQETRTTNAGKAEVYGLELEASAVPVDGLTLSASLGWQKAKYLEFLTDVDGDGV
NDDASNLKLRNVPKWTANASANYAFPPTDWGQVSLNADVNYQSQYESVTLNAPYTQGQAR
TLVGASIQWNDPSERYRVSIFGRNLLDETYRVSANSVAGLFNFTNYAPPRSYGIELGVKF
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagtttctccggggcgcgacgcgcgtcctgggaacggcgacgatcgccttcttg
acatccaccagcgcgaccgcactggcccagacggccaccccgccgaccgcgcccgaccag
gccggggaccggcagggccaggccgccgggctcgaggacatcgtcgtcaccgcgcggcgc
gtcaaggaatcgctgcaggagacgccggtcgcggtgaccgccttctccgcggccgcgatc
gaccgcaaattcgccaccgacatccgcgcgctcgccggcgacgtgcccaacgtcgtcatc
accaacgtgccgggcttcaacgccgcctcgatcggcattcgcggccagtcgaccggcgac
atcatcctgaccttcgagcccgcggtcggcgtcgtcgtcgacgatttcgtgctcgcccat
gtccagacccagctgttcgacctgttcgacatcgaccggatcgaggtgctgcgcggcccg
caggggactctgttcggcaagaacaccgtcggcggcgtcgtcaacgtcatcaccaagcgg
cccgagaaggatttcggcggcgagctgcggctcggctattcgagcttccggaccaaggac
gtcaaggcggcgatcaacatcccgctgtccgacaacctgttcttccgcgccgccggctcc
ttccaggaaagcgacggctattatcggctgaccaagaccaacaatgtcgacttcatcccg
gtcgacgtgccggcgcgcggccagcgctggggcggcacccgctatttcagcggccgcgcc
aagctgctgtgggagccgggccccgacaccaacgtgctgctgacctacgagatgctgcgc
gaccggggcgattccccgcccagcgtcaacgagacgccgaagggcttcctgttcgacgtg
gtcggcttccccggcatccagacgaccggcggcagcccgttcgacaccggcaccacgctg
tgccggggcgacatcaacgcggcgacctgcccgggcaccctgctcggccaccgcatcgac
gtcgacggcggctatctgcgcgtcgagcacagcttccccgatgtcggcgcgctgaccgtg
gtcggcggctatcggcgggtgaagtcgatcctgccgtccgactataccggcgaaagcgcc
tatctgttcgtgtcgacccgcgacgacgtgcgcgagcagtacagcgtcgaggcgcgcttc
tcgtccgacttctcggaccggatcaagttcaccgccggcaccatgtactggggccagacg
ctcgacgccaaggcgacctcgttcctcggcttcctgcgcttcctgggcgatcccaccgcg
ctcaccgatcccaaccagtcgaccgccaactacaaggtcgacagctatgcggcgttcggc
gaggcggaatacaaggtcagcgatcccttcgcgctgttcctcggcgggcgctacaccaag
gagaagaagagcttctcggtccggccgcaggtgcgccgctcgaccatcgcgaccggcttc
tggcccgaatattcggacagcgccagcttctccaagcccaccttccgcgccggctatcgc
tggcagatcgcggacgggatcaacaattatttcacctacagccagggctacaagtcgggc
ggctacaacgagcaggcgatgtccgccacctcggcgctgccgttcaaggaggagaccgcc
gacagcttcgagctgggcctgaagaccgagacggccgaccgccgcctgcgcttcaacgcc
gcggccttctacgtccgctacgacgacctgcagcgcgacgcggtggtgccgttcgtcgat
ccgatcaccggcctgccgggacaggagacgcggaccaccaacgccggcaaggccgaggtc
tacggcctcgagctggaggcgagcgcggtgcccgtcgacggcctgacgctgagcgcgtcg
ctcggctggcagaaggcgaaatatctggagttcctgaccgacgtggacggcgacggcgtc
aacgacgacgcctccaacctgaagctgcgcaacgtgccgaaatggacggcgaacgcctcg
gccaactatgccttcccgcccacggactggggccaggtcagcctcaacgccgacgtcaac
taccagtcccaatatgagtccgtgaccctcaacgccccctatacccaggggcaggcgcgg
accctggtcggggcgagcatccagtggaacgatccgtcggagcgctatcgcgtctcgatc
ttcggccgcaatctgctggacgagacctaccgcgtctcggccaattcggtcgcgggcctg
ttcaatttcaccaactatgctccgccccgttcctacgggatcgagctgggcgtgaaattc
tga
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