Rhizorhabdus wittichii RW1: Swit_1073
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Entry
Swit_1073 CDS
T00538
Name
(GenBank) protocatechuate 3,4-dioxygenase, beta subunit
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00362
Benzoate degradation
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
swi01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Swit_1073
00624 Polycyclic aromatic hydrocarbon degradation
Swit_1073
Enzymes [BR:
swi01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Swit_1073
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
NOMO1-like_2nd
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ABQ67439
UniProt:
A0A9J9H9Y8
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Position
complement(1198516..1199229)
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AA seq
237 aa
AA seq
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MKMDDRFAADDAGAPPSRHVDYRSTLLRAPDQPPIDIPQTITELTGPGDWGRLMGGALAD
LTTQHKGTPIGQRILVSGQVLDEDRRPVPNTVIEIWQANAAGRYIHYNDRWDAPIDPNFT
GAGRVVTDEAGRYSFTTIRPGAYPWGNHHNAWRPAHIHLSLFGPAFATRLVTQFYFPDDP
LIEIDPIANAVPMPYRQRLVARFDIGSTIANWALGYRFDLVLKGREQTPFEDDAHDH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggatgaccggttcgctgccgacgatgcgggcgcgccgccgtcgcgccatgtc
gattatcgctccacgctcctgcgtgcgccggaccaaccgccgatcgatatcccgcagacc
atcaccgagctgaccgggccgggcgactgggggcggttgatgggcggagcgcttgccgat
ctgacgacccagcacaagggaacgccgatcgggcagcgcatcctggtctccggtcaggtg
cttgacgaagaccggcgccccgtgccgaacaccgtgatcgaaatctggcaggcgaatgcc
gccggccgctatatccattataacgaccgctgggatgcgccgatcgatcccaacttcacc
ggcgccgggcgggtcgtcaccgacgaggcggggcggtacagcttcaccaccatccggcca
ggcgcctatccatggggcaaccatcacaatgcgtggcgacctgcgcatatccacctgtcg
ctgttcggccccgcctttgcgacgcggctcgtcacccaattctattttccggacgacccg
ctgatcgagatcgatccgatagccaatgccgtgcccatgccctatcgtcagcgcctcgtg
gcacggttcgacatcggctcgacgattgccaactgggcgttgggctaccgtttcgatctg
gtgctgaaagggcgcgagcagacgcctttcgaggacgatgcgcatgaccattga
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