Rhizorhabdus wittichii RW1: Swit_1285
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Entry
Swit_1285 CDS
T00538
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K10943
two-component system, response regulator FlrC
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi02020
Two-component system
swi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Swit_1285
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Swit_1285
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
swi02022
]
Swit_1285
02035 Bacterial motility proteins [BR:
swi02035
]
Swit_1285
Two-component system [BR:
swi02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Swit_1285
Bacterial motility proteins [BR:
swi02035
]
Flagellar system
Flagellar assembly proteins
Others
Swit_1285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_3
AAA_19
MCM
MerR
AAA_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABQ67650
UniProt:
A0A9J9H9T8
LinkDB
All DBs
Position
1437776..1439053
Genome browser
AA seq
425 aa
AA seq
DB search
MVMIGISEKAQGSQPTLVSWLAGAGIETMLIDPAATQGRDGRRILHVTEVGMARQQDVLI
DFADGTPVLRRAKVGRPATAIFGFEDMAFGHALIAELIRPRPMPACGEPESARFIGIAAR
VARSDATVLLLGETGTGKEGVARYIHAASPRADKPFVAVNCAALPETMLEAMLFGHQKGA
FTGASGAGEGLFRAAEGGTLLLDEIAELPLALQAKLLRALQEREVLPVGATAPVAVDLRI
IASGNRDLAVEVEAGRFRADLYWRLNVMPLVLKPLGARRQDIRAIAAALMLRHTPEHEEL
AWPTAQALDRLMAHDWPGNVRELENVLQRAMLMRDGARIVAEDLIIDRTRAAPRAAVAAV
ETAPTAPVVADPAPIRLADAKRISQARAIEEALAATGGHRLRAAQRLGISERTLRYRMAD
MRAVA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgatgatcggcatcagcgagaaggcgcagggttcgcagccgacgctcgtgtcgtgg
ctggccggcgccggcatcgagacgatgctgatcgatccggccgcaacccagggccgcgac
ggccgccgcatcctgcacgtcaccgaagtcggcatggcccggcagcaggacgtgctgatc
gatttcgccgacggcactccggtgctgcgccgcgccaaggtcggccgcccggcgaccgcc
atcttcggcttcgaggacatggcgttcggccacgcgctgatcgccgagctgatccgtccc
cgcccgatgcccgcctgcggcgaacccgagagcgcgcgcttcatcggcatcgccgcgcgc
gtcgcccggagcgacgccaccgtcctgctgctcggcgagaccggcaccggcaaggagggc
gtcgcccgctacatccacgccgcctcgccccgcgccgacaagccgttcgtcgcggtcaat
tgcgcggcgctgcccgaaaccatgctcgaagcgatgctgttcggccaccagaagggcgcc
ttcaccggcgccagcggcgcgggcgagggcctgttccgcgcggccgagggcggcacgctg
ctgctcgacgagatcgccgagctgccgctcgcgctccaggccaagctgctccgcgcgctc
caggagcgcgaggtcctgcccgtcggcgccaccgcgccggtcgcggtcgacctgcgcatc
atcgcctccggcaaccgcgacctcgcggtcgaggtcgaggccggccgcttccgcgccgac
ctctactggcggctcaacgtcatgccgctcgtcctcaagccgctcggcgcccgccgccag
gacatccgcgcgatcgccgccgccctgatgctgcgccacacgcccgagcatgaggagctg
gcctggccgaccgcgcaggcgctcgaccggctgatggcgcatgactggcccggcaatgtc
cgcgagctggagaacgtcctgcagcgcgcgatgctgatgcgcgacggcgcgcggatcgtc
gccgaagacctgatcatcgaccgcacccgcgccgcgccgcgcgctgccgtcgccgccgtc
gaaaccgcgccgaccgcgcccgtcgtcgccgatccggccccgatccgcctggccgacgcc
aagcggatcagccaggcccgcgcgatcgaggaagcccttgccgccaccggcggccaccgt
ctccgcgccgcccagcggctcggcatctccgaacgcaccctgcgctatcgcatggccgat
atgcgcgcggtggcttga
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