Rhizorhabdus wittichii RW1: Swit_1473
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Entry
Swit_1473 CDS
T00538
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00630
Glyoxylate and dicarboxylate metabolism
swi00680
Methane metabolism
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
swi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Swit_1473
09102 Energy metabolism
00680 Methane metabolism
Swit_1473
Enzymes [BR:
swi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Swit_1473
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_21
Fer4_9
Fer4_10
Fer4_8
Fer4_15
Fer4_16
Fer4_2
Fer4_6
Fer4_17
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ABQ67837
UniProt:
A0A9J9HAD3
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Position
complement(1622964..1625807)
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AA seq
947 aa
AA seq
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MAWIGEIDLGTKAVPVTGPMVALTIDDQRVEVPEGTSIMRAAALMGTTIPKLCATDMLES
FGSCRLCLVEIDGRAGYPASCTTPVAPGMVVRTQTAKLQELRRGVMELYISDHPLDCLTC
SANGDCELQDMAGAVGLREVRYGYEGENHLVAEKDESNPYFTFDSTKCIVCSRCVRACDE
VQGTLALTVDGRGFQSHIAASQDQDFLSSECVSCGACVQACPTSALIEKSVIEKGTPDRA
VVTTCAYCGVGCAFRAELRGEELVRMVPWKDGKANRGHSCVKGRFAWGYAQHRERILKPM
VRASVDQPWREVGWDEAIAHVASEFRRIQATYGTRSVGGITSSRCTNEETFLVQKLIRQG
FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVQQADVIMVIGANPTDGHPVFASR
MKRRLREGARLIVVDPRRTDLVRSARIAADHHLPLKPGTNVAVLTAMAHVIVEEELADEA
YIRERCDWDEYQDWAAFVAEPHRSPEATEALTGVPAAELRAAARLYATGGNGAIYYGLGV
TEHSQGSSTVMAIANLAMATGNIGREGVGVNPLRGQNNVQGSCDMGSFPHEYSGYRHVSD
PETRALFETAWGVPLDPEPGLRINNMLDAATDGVFKGLFIQGEDILQSDPNTTHVAAGLA
AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQLVRKVMAPLNGHADWEI
VQLVARAMGLDWTYDHPSEIMDEIARLTPSFAGVSFDLIAKYGSIQWPANEKAPLGTPTM
HIGGFARGKGKFVVTDYVATDEKTGPRYPLLLTTGRILSHYNVGAQTRRTANVAWHPEDL
LEIHPLDAENRGIKDRDWVYLRSRAGETTLRASVTERVAPGVVYTTFHHPVTQANVITTD
YSDWATNCPEYKVTAVQVGLSNGPSEWQEDYSEQARQSRRILVEAAE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggatcggcgaaatcgacctcggcaccaaggcggtgccggtgaccggcccgatg
gtggcgctgaccatcgacgaccagcgggtcgaggtgcccgagggcacgtcgatcatgcgc
gcggcggcgctgatggggacgaccatccccaagctgtgcgcgaccgacatgctcgaaagc
ttcggctcgtgccggctctgcctggtcgagatcgacgggcgggcgggctaccccgcctcc
tgcaccacgccggtggcgccgggcatggtggtccgcacccagaccgccaagctccaggaa
ctgcggcgcggggtgatggaactctacatctccgaccatccgctcgactgcctgacctgc
tcggccaatggcgattgcgagttgcaggacatggccggcgcggtcggcctgcgcgaggtg
cgctacggctatgagggggagaaccacctcgtcgccgagaaggacgagtccaacccctat
ttcaccttcgacagcaccaagtgcatcgtctgctcgcgctgcgtgcgcgcctgcgacgag
gtgcaggggacgctggcgctgaccgtcgacgggcgcggcttccagtcgcacatcgccgcc
agccaggatcaggatttcctctcctccgaatgcgtgagctgcggcgcctgcgtccaggcc
tgcccgacctcggcgctgatcgagaagtcggtgatcgagaagggcacccccgaccgcgcc
gtcgtcaccacctgcgcctattgcggggtcggttgcgccttccgcgccgagctgcgcggc
gaggaactggtgcggatggtgccgtggaaggacggcaaggccaatcgcgggcatagctgc
gtcaagggccgcttcgcctggggctatgcccagcatcgcgagcgcatcctgaagccgatg
gtccgcgcctcggtcgaccagccctggcgcgaggtgggctgggacgaggcgatcgcccat
gtcgcgtccgagttccgccgcatccaggcgacctacggcacccgttcggtcggcggcatc
acctccagccgctgcacgaacgaggagaccttcctcgtccagaagctgatccggcagggc
ttcggcaacaacaatgtcgatacctgcgcgcgggtctgccattcgccgaccggctatggg
ctgaagacgaccttcggcacatcggccggcacccaggatttcgacagcgtccagcaggcg
gacgtgatcatggtgatcggcgccaacccgaccgacggccacccggtcttcgccagccgg
atgaaacggcggctgcgggaaggcgcgcggctgatcgtcgtcgatccgcgccgcaccgat
ctggtgcgcagcgcgcgcatcgccgccgatcatcacctgccgctcaagccgggcaccaac
gtcgcggtgctgaccgcgatggcgcatgtcatcgtcgaggaagagctggcggacgaggcc
tatatccgcgagcgttgcgactgggacgagtatcaggactgggcggcgttcgtggccgag
ccgcatcgctcgcccgaggcgaccgaggcgctgaccggcgttccggccgccgagctgcgc
gccgccgcccggctctatgcgaccggcggcaatggcgcgatctattacggcctcggcgtc
accgagcacagccagggatcgtcgacggtgatggcgatcgccaacctcgccatggcgacc
ggcaatatcggccgcgagggcgtgggcgtgaatccgctgcgcggacagaataacgtccag
ggctcgtgcgacatgggcagcttcccgcacgaatattcgggctatcgccacgtctccgac
ccggagacgcgggcgctgttcgagacggcatggggcgtgccgctcgatcccgagccgggc
ctgcggatcaacaacatgctcgacgccgcgaccgacggcgtcttcaagggccttttcatc
cagggcgaggacatcctccagtccgatcccaacacgacccatgtcgccgcgggcctcgcc
gcgatggaatgcgtggtggtgcaggacctgttcctcaacgagaccgccaactacgcccat
gtcttcctgccgggctcgaccttcctggagaaggacgggaccttcaccaatgccgagcgc
cgcatccagctcgtccgcaaggtgatggcgccgctcaacggccatgctgactgggagatc
gtccagctcgtcgccagggcgatggggctcgactggacctacgaccacccgtccgagatc
atggacgagatcgcccgccttacgccgagcttcgccggagtcagcttcgacctgatcgcg
aagtatgggtcgatccagtggcccgccaacgagaaggccccgctcggcacgccgacgatg
cacatcggcggcttcgcgcgcggcaagggcaagttcgtggtcaccgactatgtcgcgacc
gacgagaagaccggcccgcgctatccgctgctgctgaccaccggtcgcatcctcagccat
tacaatgtcggcgcgcagacgcggcgcaccgccaatgtcgcctggcatcccgaggacctg
ctggagatacacccgctcgacgccgagaatcgcggcatcaaggatcgcgactgggtctat
ctgcgcagccgcgcgggcgagacgacgctgcgcgcttcggtgaccgagcgggtggcgccc
ggcgtggtctacaccaccttccaccatccggtgacgcaggccaatgtcatcaccaccgac
tattccgactgggcgaccaactgtccggagtacaaggtcacggccgtgcaggtcggcctg
tccaacggcccctccgaatggcaggaggattatagcgaacaggcgcggcagagccgccgc
atcctcgtcgaggccgccgaatga
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