Rhizorhabdus wittichii RW1: Swit_2226
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Entry
Swit_2226 CDS
T00538
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_2226
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_2226
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ68585
UniProt:
A0A9J9LE31
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Position
2480066..2482423
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AA seq
785 aa
AA seq
DB search
MDRRFLRDLQKGTELMQPTFAKSISLPALLAITVSAVALAAPARAQDGVAADGDGGDIVV
TARKARERLQDVPISVNALSGDQLRDRGAVDVKDVLRSVPGLSFSGTERGLGNYNIRGIS
TVASAPTVGIYLDDISLVTIATSFSGAFDPVFFDMERLEVLKGPQGTLYGGSSMGGAIKY
VSARPKLNVIEGSVAAGIGTTAHGTASYNAEAVLNLPLVADKLSVRGGVFYRHDGGYVDN
VAAGTVTNSRYSSTAPGYTPQAQPSLSTRNQANYNDADTYVGRLSLLWQPDESWSIRPAA
FYQHYKLANPGQFFLGMPELTASYRIKQPTTDKAGIYSLAIDKELGAVQATSLTAYFDRK
LDFVRDYSYFIGGLVPPLYPLTSRNLSASRTKTFSQELRLASNDPGARLTWIAGLYYSHQ
DDRLYQIAVTPGATPVIGTEVGYVGDTTTITKQYAAFGEATYKLLDNLDITAGVRLFQIK
QIVDILGDGPFNGGLTQIVGRKSNEKGVNPKVGISYKVTRDNLIYASAAKGFRPGGPNRF
QINPALCATDLARLGLTAAPNTFDSDNLWSYELGTKNQFGSSVLVNAALFYTDWKKIQQQ
INLSSCGFAFTGNAGSADVKGAELETRFNLTRAFQVGGTATYSDAKISTAALGTSAQDGD
QVLAVPKWMLSGFASYSVEVADGWRGQIRGEYQYQSRSRRQFDRIQSVVFPGGVPGTAPN
RAEFRQGYQVVNAFASVGDGETEVRLYLNNVFDVAPRLDTDLTGGSDRSTTIRPRTVGLE
VRRRF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaagattcctgcgcgaccttcaaaaggggaccgaattgatgcagcccaccttc
gccaagtccatttccctgcccgccctgctggcgatcaccgtctctgccgtcgcgctcgcc
gcgccggcccgcgcgcaggacggcgtcgcggccgacggcgacggcggcgacatcgtcgtc
accgcccgcaaggcgcgcgagcgcctccaggacgttccgatctcggtcaacgcgctgtcc
ggcgaccagctccgcgatcgcggagcggtcgacgtcaaggacgtgctgcgcagcgtcccc
ggcctgtccttctcgggcaccgagcgcggcctcggcaactacaacatccgcggcatcagc
accgtcgcctcggcgccgacggtcggcatctatctcgacgacatctcgctcgtcaccatc
gccacctcgttcagcggcgccttcgacccggtgttcttcgacatggagcggctggaggtg
ctgaagggcccgcagggcacgctctacggcggcagttcgatgggcggcgcgatcaaatat
gtcagcgcccggccgaagctgaacgtgatcgaaggcagcgtcgccgccgggatcggcacc
accgcgcacggcaccgcctcctataatgcggaggcggtgctcaacctgccgctcgtcgcc
gacaagctgtcggtgcgcggcggcgtcttctatcgccacgacggcggctatgtggacaat
gtcgccgccggcaccgtcaccaactcgcgctattcgagcacggcccccggctacacgccg
caggcgcagccgtcgctgagcacccgcaaccaggccaactacaacgacgccgacacctat
gtcggccgcctgtcgctgctgtggcagcccgacgagagctggtcgatccggccggccgcc
ttctaccagcactacaagctcgccaatcccggccagttcttcctcggcatgcccgagctg
accgcttcctaccggatcaagcagccgaccaccgacaaggcgggcatctacagcctggcg
atcgacaaggagctgggcgcggtccaggcgacctcgctgaccgcctatttcgaccgcaag
ctcgatttcgtccgcgactacagctatttcatcggcgggctggtgccgccgctctacccg
ctgaccagccgcaacctgtcggccagccgcaccaagaccttcagccaggagctgcgcctc
gcctcgaacgatcccggcgcgcggctgacctggatcgcgggcctctattattcgcaccag
gacgaccggctctaccagatcgcggtcacccccggcgccaccccggtgatcggcaccgag
gtcggctatgtcggcgacaccaccaccatcaccaagcaatatgccgccttcggcgaggcg
acctacaagctgctcgacaatctcgacatcaccgccggcgtgcggctgttccagatcaag
cagatcgtcgacatcctcggcgacggcccgttcaacggcggcctgacccagatcgtcgga
cgcaagagcaacgagaagggcgtcaatccgaaggtcggcatctcctacaaggtgacgcgc
gacaacctgatctacgcctcggcggcgaagggcttccgccccggcggcccgaaccgcttc
cagatcaacccggcgctgtgcgccaccgacctcgcccggctgggcctgacggcggcgccc
aacaccttcgattcggacaatctgtggagctatgagctgggcaccaagaaccagttcggc
agcagcgtcctggtcaacgccgcgctgttctacaccgactggaagaagatccagcagcag
atcaatctgtcgagctgcggcttcgccttcaccggcaatgccggcagcgccgacgtcaag
ggcgccgagctggagacccggttcaacctgacccgcgcgttccaggtcggcggcaccgcg
acctacagcgacgccaagatctccaccgccgcgctcggcaccagcgcgcaggacggggac
caggtgctcgccgtgccgaaatggatgctgagcggcttcgccagctacagcgtcgaggtg
gccgacggctggcgcgggcagatccgcggcgaatatcagtatcagagccgctcgcgccgc
cagttcgaccggatccagtcggtggtcttccccggcggcgtgcccggcacggcgcccaac
cgcgccgagttccgccagggctatcaggtggtcaatgccttcgcctcggtcggcgacggc
gagaccgaggtccgcctctacctcaacaatgtcttcgacgtggcgccgcggctcgacacc
gacctgaccggcggatcggaccgttcgacgacgatccggccgcgcaccgtcggcctcgaa
gtccggcggcgcttctaa
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