Entry |
|
Name |
(GenBank) HhH-GPD family protein
|
KO |
|
Organism |
swi Rhizorhabdus wittichii RW1
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:swi00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Swit_2427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:swi03400]
Swit_2427
Enzymes [BR:swi01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Swit_2427
DNA repair and recombination proteins [BR:swi03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Swit_2427
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2698055..2699161
|
AA seq |
368 aa
MRPPALEAKQKRIGPRPDPSSSIFRRDRDGQAVELVGHGELARQARAVVAMVAAVEQVVL
VVAHVGEQAVEGRIDEHMAGRAGAAAAAQRQQLVDSGVTDDLHHRQAGLRFDDRFLTLTR
NDNQLGHYHSPDLHNPDFARLCSAGPVKSRAGTEMSLSAEQLHRSIDALAGIEPAIARML
EAIGYPPPRIRDRGYQTLLRTIVGQQVSVAAANAIWAKMETMVGAGLAPEAVAAAPDDLL
RATGLSRQKIAYARSLAEHVASGTIDFDRLPADDEEAIAQMTAIKGIGRWSAEIYLLFAE
GRGDVWPAGDLAVQIEVGRLLGLPERPSERETRRLAHGWSPHRGAAAIFAWHSYNARAST
AKTDKMPL |
NT seq |
1107 nt +upstreamnt +downstreamnt
atgcgaccgccggcgcttgaggccaaacaaaaaaggatcgggcctcggcccgatcccagc
agctcaatcttccggcgcgatcgtgacggtcaggccgtcgagctcgtcggtcatggtgag
ctggcacgacaggcgcgagcggtcgtcgcgatggtcgctgctgtcgagcaggtcgttctc
gtcgtcgctcatgtcggggagcaggccgttgaaggccggatcgacgaacacatggcaggt
cgcgcaggagcagcagccgccgcacagcgccagcagctcgtcgattccggcgtcacggat
gacctccatcaccgacaggccggtctccgcttcgatgaccgattcctcaccctcacgcgt
aacgacaaccaacttgggcattaccactcccccgatttgcataatccggatttcgcgcgc
ctatgtagcgcgggaccggtgaaatcaagagcaggaaccgaaatgagcctttccgccgaa
cagctccaccggagcatcgatgcgctggcgggcatcgaaccggccatcgcgcgcatgctg
gaagcgatcggctaccccccgccgcgcatccgcgatcgcggctaccagacgctgctgcgg
acgatcgtcggccagcaggtgagcgtcgccgccgccaatgcgatctgggcgaagatggag
acgatggtcggtgccggcctcgcccccgaggcggtcgccgccgcccccgacgacctgctc
cgcgccaccggcctgtcgcggcagaagatcgcctatgccaggagcctggccgagcatgtc
gcgagcggcacgatcgatttcgacaggctgcccgccgacgacgaggaggcgatcgcacag
atgaccgcgatcaaggggatcggccgctggtcggcggagatctacctgctgttcgccgaa
gggcgcggcgacgtctggccggccggcgacctcgccgtgcagatcgaggtcggccgcctg
ctgggcctgcccgagcggccgagcgagcgcgagacgcggcgcctggcgcatggctggagc
ccgcatcggggcgccgccgcgatcttcgcctggcatagctacaacgcgcgcgccagcacg
gccaagaccgacaagatgccgctctga |