Rhizorhabdus wittichii RW1: Swit_2522
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Entry
Swit_2522 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_2522
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_2522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABQ68881
UniProt:
A0A9J9HC86
LinkDB
All DBs
Position
complement(2802005..2804107)
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AA seq
700 aa
AA seq
DB search
MKRGLLIGVAAAGFAGVMATAPAAAQVVASDQDELIVTARKQSENIRDVPDTIQAFSATT
LERAGIESVNDLTQMVSGFRIVEAQQPGVVLINIRGIGQVRNGESPVAVVVDGVQQNSPN
QITQDLFDVERIEILKGPQGALYGRNAIGGAINIVTKEPGDSFGGSAELGYAEGDEFRAK
ASITAPLGEKAGFRLAGSYLNRDGQITNSTLNKKVDFDETWAVRGALLLKPTETLKIDLR
GSYYDQDAGASWYVGGPANSPRVPVVGNILGKAGRKLGDVSAKIDFDLGSVALTSVTAWS
SVKSDLFEELDWEPQDLAAATQTLDVKAWSEELRLSSNTPGSALRWMTGLYYLHTDRTLN
TAIFLGPDLTGLPSRVLGSRLIAKDDNDAYAAFGQVNYDIVEHLELTAALRYDIDRRRQD
DVSPPVPAVVPRYKGTYKSLQPKLSLAYSFPGGSLAYATVAKGFRSGGFNSNAVVTREFK
KEELWNYELGFKTALADRKLYLNGAIFYSDITDRQVFGLDLSTGPAQFIANPIPKSSVWG
AELEMTARPVKGLELSMGASLMDTKINTYDVTVFSGTAARGDFKGNKLNQVPRYTLNAAA
QYTADLGGSSLISRVDVSGWGGDYYWEIDNAQKQKPVWLVNARLTWAVGKVELTGFVKNL
FDRRYDVEFVPVNFGGTITGKDLGSASPPRQIGGSAKVRF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggggctgctcatcggcgtggcggcggcgggattcgcgggcgtcatggcgacc
gcgccggcggcggcgcaggtcgtcgccagcgatcaggacgaactgatcgtcaccgcgcgc
aagcaatcggagaatatccgggacgtgcccgacacgatccaggccttctccgcgacgacg
ctcgaacgggcgggcatcgaatcggtcaacgacctgacccagatggtgtcgggcttccgc
atcgtcgaggcgcagcagcccggcgtcgtgctgatcaacatccgcggcatcggccaggtg
cgcaacggcgaatcgccggtcgcggtggtcgtcgacggggtgcagcagaactcgccgaac
cagatcacccaggacctgttcgacgtcgagcggatcgagatcctcaaggggccgcagggc
gcgctctatggccgcaacgcgatcggcggcgcgatcaacatcgtcaccaaggagccgggc
gacagcttcggcggcagcgccgagctcggctatgccgagggcgacgagttccgcgccaag
gcctcgatcaccgcgccgctgggcgagaaggcgggcttccgcctggcgggcagctatctg
aaccgcgacggccagatcaccaattcgacgctcaacaagaaggtcgacttcgacgagacc
tgggcggtgcgcggcgcgctgctgctcaagccgaccgagacgctgaagatcgacctgcgc
ggcagctattacgaccaggatgccggcgcctcctggtatgtcggcggcccggcgaacagc
ccgcgggtgccggtggtcggcaacatcctcggcaaggcgggacgcaagctgggcgacgtc
tcggcgaagatcgacttcgacctgggctcggtcgcgctgacctcggtcactgcctggtcg
tcggtcaagtcggacctgttcgaggagctcgactgggagccgcaggacctcgccgccgcc
acccagacgctcgacgtcaaggcgtggagcgaggagctgcggctgtcgtcgaacaccccc
ggatcggcgctgcgctggatgaccgggctctattatctccacaccgaccgcaccctgaac
accgcgatcttcctcggccccgacctgaccggcctgccgagccgggtgctcggctcgcgg
ctgatcgcgaaggacgacaacgacgcctatgcggcgttcggccaggtcaactacgacatc
gtcgagcatctcgagctgaccgccgcgctgcgctacgacatcgaccggcgccgccaggac
gacgtctcgccgccggtgcccgccgtcgtcccgcgctacaaggggacgtacaagtcgctc
cagcccaagctgtcgctggcctacagcttccccggcgggtcgctcgcctatgcgaccgtc
gccaagggcttccgcagcggcggcttcaactcgaacgcggtggtcacgcgcgagttcaag
aaggaggagctgtggaactatgagctcggcttcaagaccgcgctcgccgaccgcaagctc
tacctgaacggcgccatcttctacagcgacatcaccgaccggcaggtgttcggcctcgac
ctcagcaccggcccggcgcagttcatcgccaacccgatccccaagtcgagcgtctggggc
gccgagctggagatgacggcgcgcccggtcaaggggctggagctgtcgatgggcgccagc
ctgatggacacgaagatcaacacatatgacgtgacggtcttctcgggcaccgccgcgcgc
ggcgacttcaagggcaacaagctcaaccaggtgccgcgctacacgctcaacgcggcggcg
caatacaccgccgatctgggcggcagcagcctgatctcgcgcgtcgacgtctccggctgg
ggcggcgactattattgggagatcgacaacgcccagaagcagaagccggtctggctggtc
aatgcgcggctgacctgggcggtcggcaaggtcgagctgaccggcttcgtcaagaacctg
ttcgaccggcgctacgacgtcgagttcgtgccggtcaatttcggcggcacgatcaccggc
aaggacctgggctcggcgtcgccgccccgccagatcggcggcagcgccaaggtgcgtttc
tga
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