Rhizorhabdus wittichii RW1: Swit_2613
Help
Entry
Swit_2613 CDS
T00538
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K24073
RNA polymerase sigma factor CnrH
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
swi03021
]
Swit_2613
Transcription machinery [BR:
swi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Swit_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_Tnp_ISL3
GerE
Motif
Other DBs
NCBI-ProteinID:
ABQ68971
UniProt:
A0A9J9HCD8
LinkDB
All DBs
Position
complement(2896720..2897298)
Genome browser
AA seq
192 aa
AA seq
DB search
MNPGEGEEPDDGALAARALAGHEDAYRLLMARHRVPVHRFVRAQVADADAALDIVQESFI
AAFAHLGRYDRDRPFRHWLMRIALNKCRDHRRRQIVRGFFARARPLDEGLHVAGAEPGAD
AEIGGRQELRRARQAIDALPEKLRSVLLLRTVEGMSQAEVAALLGVSGKSVETRLYRARL
KLSEMLGPTPTP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgggcgagggggaggagccggacgacggcgcgctcgccgcccgcgcgctggcg
gggcatgaggacgcctatcggctgctgatggcgcggcaccgggttcctgtccaccgcttc
gtccgcgcccaggtcgccgatgccgacgcggcgctcgacatcgtccaggaaagcttcatc
gccgccttcgcccatctcggccgctacgatcgcgaccggccgttccgccactggctgatg
cggatcgcgctcaacaagtgccgcgaccatcgccgccgtcagatcgtgcgaggcttcttc
gcgcgcgcccggccgctcgacgaggggctgcacgtcgccggggccgagccgggcgccgat
gccgagatcggcgggcggcaggaattgcggcgggcgcggcaggcgatcgacgccctgccg
gagaagctccgctcggtgctgttgctgcgcaccgtcgaggggatgagccaggccgaggtg
gcggccctgctcggcgtcagcgggaagagcgtcgagacgcggctctaccgcgcccgcctc
aaattgtccgagatgctggggcctacgccgactccataa
DBGET
integrated database retrieval system
