KEGG   Rhizorhabdus wittichii RW1: Swit_2656
Entry
Swit_2656         CDS       T00538                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi02024  Quorum sensing
swi03060  Protein export
swi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:swi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Swit_2656
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Swit_2656
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_2656
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_2656
Enzymes [BR:swi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Swit_2656
Secretion system [BR:swi02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Swit_2656
  Eukaryotic Sec-SRP protein
   Swit_2656
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA Zeta_toxin AAA_22 ABC_tran AAA_33 AAA_16 Thymidylate_kin GTP_EFTU YqeC APS_kinase AAA_30 AAA_31 ResIII AAA_19 ArsA_ATPase cobW VirC1 NPHP3_N AAA AAA_17 MMR_HSR1 DnaB_C AAA_5 nSTAND3 AAA_14 AAA_24 NACHT 6PF2K KTI12 AAA_7 NB-ARC
Other DBs
NCBI-ProteinID: ABQ69012
UniProt: A0A9J9HCN0
LinkDB
Position
2937605..2939080
AA seq 491 aa
MFESLSERLGGVFDRLRGRGALNESDVREAMREVRVALLEADVALPVVRQFVEKVTEQAV
GQQVLRSVTPGQQVVKIVNDALVEMLGSEASDLNLDVTPPAIVMMVGLQGSGKTTTTAKI
AKRLSEKGRKKVMMASLDVNRPAAQEQLAVLGTQASVATLPIVAGQQPVDIARRALQAAK
LQGFDVLMLDTAGRLHVDQALMEEMKAVATVAEPEEILLVVDALTGQDAVNVAKSFSEQV
ALTGVVLTRMDGDARGGAALSMRAVTGKPIKFVGTGEKLDGIELFQPARVAGRILGMGDV
VSLVEKAAETIKVEEAEALAARMAKGLFDLNDLRNQLRQMSRMGGLSGLAAMLPGIKQVK
QAMASGAADDKVLVRMDAIIGSMTPKERAKPELLNAKRKIRVAKGSGTTVQDVNKLLKMH
QDMSTVMKKMKKMGGLKGLAGLLGGGGGGGLGGLLGGGGAPPAGGGLPGLPGLPGNPQGL
PPGFQNFLKKR
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgttcgaaagtctgagcgaaaggctgggcggggtcttcgaccgcctgcgcggccgtggc
gcgctgaacgaatcggacgtgcgcgaggcgatgcgcgaagtccgcgtcgcgctgctcgag
gccgacgtcgccctgcccgtcgtccgccagttcgtcgagaaggtcaccgagcaggccgtc
ggccagcaggtgctccgctcggtcacgccggggcagcaggtcgtcaagatcgtcaacgac
gcgctggtcgagatgctcggctcggaggcgtcggacctcaacctcgacgtcaccccgccc
gcgatcgtgatgatggtcggcctgcagggctcgggcaagacgacgaccaccgccaagatc
gccaagcggctcagcgagaagggccgcaagaaggtgatgatggcgtcactcgacgtcaat
cgtccggcggcgcaggaacagctcgccgtgctcggcacccaggcatcggtcgcgaccctg
ccgatcgtcgccggccagcagccggtcgacatcgcccgccgcgcgctccaggccgcgaag
ctccagggcttcgacgtgctgatgctcgacaccgccggccgcctgcacgtcgaccaggcg
ctgatggaggagatgaaggcggtcgccacggtcgccgagccggaggagatcctgctcgtc
gtcgacgcgctgaccggccaggacgcggtcaacgtcgccaagagcttctccgaacaggtc
gcgctgaccggcgtggtgctgacccggatggacggcgacgcgcgcggcggcgccgcgctg
tcgatgcgcgccgtcaccggcaagccgatcaagttcgtcggcaccggcgagaagctggac
gggatcgaactgttccagccggcccgcgtcgccggccgcatcctcggcatgggcgacgtc
gtcagcctggtcgagaaggccgccgagacgatcaaggtcgaggaggccgaggcgctcgcc
gcgcggatggccaagggcctgttcgacctcaacgacctgcgcaaccagctgcgccagatg
tcgcggatgggcgggctgtcgggcctggcggcgatgctgcccggcatcaagcaggtcaag
caggcgatggcctccggcgccgccgacgacaaggtgctggtgcggatggacgcgatcatc
ggatcgatgacgcccaaggagcgcgccaagcccgaactgctcaacgccaagcgcaagatc
cgcgtggccaagggctccggcaccacggtgcaggacgtcaacaagctcctgaagatgcat
caggacatgtcgacggtgatgaagaagatgaagaagatgggcgggctgaagggccttgcc
ggcctgctcggcggcggtgggggcggtggcctcggcggcctgctcggcggtggcggcgcc
ccgccggcgggcggcgggcttccggggcttcccggcctgccgggcaatccgcagggcctg
ccccccggcttccagaatttcctgaagaaacgctga

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