Rhizorhabdus wittichii RW1: Swit_2862
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Entry
Swit_2862 CDS
T00538
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00300
Lysine biosynthesis
swi00470
D-Amino acid metabolism
swi01100
Metabolic pathways
swi01110
Biosynthesis of secondary metabolites
swi01120
Microbial metabolism in diverse environments
swi01230
Biosynthesis of amino acids
Module
swi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Swit_2862
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Swit_2862
Enzymes [BR:
swi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Swit_2862
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABQ69214
UniProt:
A0A9J9LEI0
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All DBs
Position
complement(3143813..3145084)
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AA seq
423 aa
AA seq
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MDHFNLKDGVLHAEDVALPAIAEAVGTPVYVYSTATIERHVAVFKAALAAVESGPEGPLI
AFAVKANPNRAVLATLARAGLGADVVSGGELLRARAAGIPADKIVFSGVGKTEAEMRLGL
EQGIFQFNIESEPEAEMLSEVAAATGRRAPVAFRINPNVIAGTHAKISTGGSEDKFGVAY
DRAIAAYARAAELPGLDVRGVAVHIGSQLTDLGPSRAAFEKIGALIAELRAAGHRIVTAD
LGGGLGVPYDPAKPVPPLPDAYGAMVREVTAGWNTRLVFEPGRVIVGNAGVLLSRVIRVK
PGVTDPFVIVDAAMNDLMRPSLYDAWHDIRAVTPNGAAMTANIVGPICESGDSFAKKRAM
DAVGPGDLVTFMTAGAYGATMANTYNSRALTPEVLVNGDQWAVVRERQPIEALIAADKLP
PWV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcaacctgaaggacggcgtcctccacgccgaggacgtggcgctgcccgcg
atcgccgaggcggtggggacgccggtctatgtctattcgaccgcgacgatcgagcggcat
gtcgcggtgttcaaggccgcgctcgccgcagtcgaatcggggcccgaggggccgctgatc
gccttcgcggtgaaggccaatcccaaccgcgcggtgctggcgacgctcgccagggccggg
ctcggcgccgacgtggtgtcgggcggcgaactgctgcgcgcgcgcgccgccggcatcccc
gccgacaagatcgtcttctcgggcgtcggcaagaccgaggcggagatgcggctcggcctc
gaacagggcatcttccagttcaacatcgaatccgagcccgaggccgagatgctctccgag
gtcgcggcggcgacgggccggcgcgcgccggtcgccttccgcatcaacccgaacgtgatc
gcgggcacccacgccaagatctcgaccggcgggtcggaggacaaattcggcgtcgcctat
gaccgcgcgatcgccgcctatgcgcgcgcggccgagctgcccgggctcgacgtccgcggc
gtcgcggtccacatcggcagccagctcaccgacctcggcccgtcgcgcgccgccttcgag
aagatcggcgcgctgatcgccgaactgcgcgccgccgggcaccgcatcgtcaccgccgac
ctgggcggcggcctcggcgtcccctatgaccccgccaagccggtgccgccgctgcccgac
gcctatggcgcgatggtgcgcgaggtgacggcgggctggaacacgcggctggtcttcgag
cccggccgggtgatcgtcggcaatgccggggtgctgctgtcgcgggtgatccgggtcaag
cccggcgtcaccgatccgttcgtcatcgtcgacgcggcgatgaacgacctgatgcggccc
agcctctacgacgcctggcacgatatccgcgcggttacgccgaacggtgcggcaatgacg
gccaacatcgtcggccccatctgtgaaagcggcgacagtttcgccaagaagcgggcgatg
gacgccgtcggtcccggcgacctcgtcaccttcatgacggcgggagcctatggggcgacg
atggccaacacctataactcgcgcgcgctgacgcccgaggtgctggtgaacggggaccaa
tgggcggtcgtccgggagaggcagccgatcgaggcgctgatcgcggcggacaagctcccg
ccgtgggtgtga
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