Rhizorhabdus wittichii RW1: Swit_2903
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Entry
Swit_2903 CDS
T00538
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swi03016
]
Swit_2903
Enzymes [BR:
swi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Swit_2903
Transfer RNA biogenesis [BR:
swi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Swit_2903
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABQ69255
UniProt:
A0A9J9HCQ9
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All DBs
Position
3190223..3190840
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AA seq
205 aa
AA seq
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MTVHLHQEDLPADALGPGPVAVDTETMGLITPRDRLCLVQISDGRGDEHLVRFAPGSDYA
APNLRAVLADPARLKLYHFARFDLAAIRHYIGVMAAPVYCTKTASRLIRTYTDRHGLKEL
VRELLGQEVSKQQQSSDWGAPDLSEAQKDYAASDVRYLHAMRTILDERLAREGRTALAQA
CFDFLPARAELDLAGWPEIDIFAHV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgacagtccatctccatcaggaagacctgcccgccgacgcgctcggccccggcccggtc
gcggtcgacaccgagacgatggggctgatcaccccgcgcgaccggctctgcctcgtccag
atctccgacgggcgcggcgacgagcatctcgtccgcttcgcccccggcagcgactatgcc
gcgccgaacctgcgcgcggtgctcgccgatccggcccggctcaagctctaccatttcgcc
cgcttcgacctggcggcgatcaggcattatatcggggtgatggccgcgccggtctattgc
accaagacggcgtcgcggctgatccgcacctataccgaccgccacggcctcaaggagctg
gtgcgcgagctgctcggccaggaggtgtcgaagcagcagcaatcgtccgactggggggcg
cccgacctgtccgaggcgcagaaggactatgccgcgtccgacgtccgctatctccacgcg
atgcggacgatcctcgacgagcggctggcgcgcgagggacggaccgcgctggcgcaggcc
tgcttcgacttcctgcccgcccgcgccgagctcgacctcgccggctggccggagatcgac
atcttcgcgcatgtttga
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