Rhizorhabdus wittichii RW1: Swit_2946
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Entry
Swit_2946 CDS
T00538
Name
(GenBank) Topoisomerase IB-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swi03032
]
Swit_2946
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_2946
Enzymes [BR:
swi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Swit_2946
DNA replication proteins [BR:
swi03032
]
Prokaryotic type
DNA Topoisomerases
Swit_2946
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Swit_2946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ABQ69298
UniProt:
A0A9J9HCP4
LinkDB
All DBs
Position
3229399..3230358
Genome browser
AA seq
319 aa
AA seq
DB search
MRHRPIDPTDTIDSAPGITRVRRGGGWRFVAPDGSTIRDPDERMRILALGIPPAWRRVWI
NPDPRAPVQATGIDAAGRKQYRYDSAWREARDEEKFAALPAFAAHLPRLRAVVRRALDSD
DPWERARAAAVRLLDGFAIRVGSDDSAARGSFGATTLLNRHARIDGDAIRLCFFGKHGIR
AELSGRDAALAAALAELKQAGAGELFAMRSGVRVRAADINQWIAELTDGSGTAKTFRTWR
ACAVAAGMLARGRRTSVKALLEEVARQLGNTPAVCRTSYVAPAFIEMAKAGRWIETVPAM
PRGLRASERASLAVLTGRT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaccgcccgatcgacccgaccgacacgatcgattccgcccccggcatcacccgc
gtccggcgcggcggcgggtggcgcttcgtcgcccccgacggctcgaccatccgcgacccc
gacgagcggatgcggatcctcgcgctcggcatcccgccggcctggcgccgggtgtggatc
aaccccgatccgcgcgcgccggtccaggcgaccgggatcgatgccgccgggcgcaagcaa
tatcgctacgacagcgcgtggcgcgaggcgcgcgacgaggagaaattcgccgcgcttccc
gcgttcgccgcgcacctgccccggctgcgcgccgtcgtccgccgcgcgctcgacagcgac
gatccgtgggaacgcgcgcgggcggcagcggtgcggctgctcgacggcttcgcgatccgg
gtcggatcggacgattcggcggcgcgcggcagcttcggcgcgacgacgctgctcaaccgc
cacgcgcggatcgacggcgacgcgatccggctgtgcttcttcggcaagcacggcatccgc
gccgagctgtcggggcgcgacgcggcgctggcggcggcgctcgccgagctcaagcaggcg
ggggccggcgagctgttcgcgatgcggtcgggggtgcgggtgcgcgccgccgacatcaac
cagtggatcgccgagctgaccgacggcagcggcaccgccaagaccttccggacctggcgc
gcctgcgcggtcgcggcggggatgctggcgcgcgggcggcggacctcggtcaaggccctg
ctggaggaggtggcccgccagctcggcaacacgccggcggtgtgccgaacatcctatgtc
gcgccggccttcatcgagatggccaaggcgggccgctggatcgagacggtgcccgccatg
ccgcgcggcctgcgcgcgagcgaacgggcgagcctggcggtgctgaccggccggacgtga
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