Rhizorhabdus wittichii RW1: Swit_3027
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Entry
Swit_3027 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3027
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3027
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABQ69377
UniProt:
A0A9J9LD92
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Position
complement(3312983..3315538)
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AA seq
851 aa
AA seq
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MINRKIRLLLVCSVAAIFAPGVAAQNAEADAVGGGSGLDEIVVTAQKRAENVQDVPIAIA
AFGGEAIQQRGISDVSQLSSITPSVVLDAGTPFAGSGAALGATIRGIGQNDFAVNVDPGV
GVYLDGIYLARTVGANVALPDVERVEVLKGPQGTLFGRNTIGGAINIVTHEPGDEFRFKG
SVTTGRFERLDVAGTADIPLSETLKSSITFASNHRDGFVKRVPYTQAGPYVQEPNTLYRE
VGYDSSSREGGVGDWSLRGKLKWEASSSLKVTVTGDYYKQNTSGLPNIVLDVLDDYPGDF
AGPGAPLVPGSALTPGTGYNFAGLYNFCINSTPAQIMGRNAQSICGPRGNELNPSTILPA
LGSANVDADPSNNRLPYDDRWVSTNWNRSYATGNSFARSKTWGFSGALDWSLSPDITLRS
ITGYREMEWASGFDGDNSPINFLHVSNSAKQHQFSQEFQLVGDTDKLGGKLNYVLGAYYF
SEKGSEDGFVTIGTGLLQIEGPIDVKNRNVSFFGQLDWRVSDLLGFTLGGRYTSEKKAFD
ARQTDYAGFSYDLFNCPVTVAICPGILGFPDPNDPLRVYPPNTPDRKFHNFSPKFGVQLH
PDDDVMVYGSYTMGYKVGGWSTRLQNPTATAPTFDDEKAKTLELGLKSTLLDRRLRFNAA
VFRTIYDNIQLLFQRGTNPLIENAGKATIKGAEADLTASINDYLSLTMSAGYLDAKLTEV
IGPTGPDSVQLGTSVGARLPKVPKFTFNLSPRVTLPVGAGDAKLVFQGDYTHTSSMWNDA
QRTFLLKRPTTDVFNASLTFRSGRNWSVTLGGTNLSNERYVVNGVAQKAGGLVYGSPNRP
REWYARLGVEF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccggaagatccgtttgctgctggtctgttccgtagcggccatttttgcgccc
ggcgtggctgcgcagaacgccgaagccgatgcggtgggtggcggctccggcctggacgaa
atcgtcgtcaccgcgcagaagcgcgcggaaaatgttcaggatgtgccgatcgctatcgcc
gcgttcggcggcgaggccatccagcagcgcggcatctccgatgtttcccagctcagctcg
atcacgccgagcgtggtgctcgatgccggcacgccgttcgccggctcgggcgcggcgctg
ggtgcgacgatccgcggcattggccagaacgatttcgcggtcaatgtcgatccgggcgtg
ggcgtctatctcgacggcatctatctcgcccggacggtcggcgccaacgtcgccctgccc
gacgtcgagcgggtcgaggtgctgaaagggccgcaaggcaccctgttcgggcgcaacacg
atcggcggcgcgatcaacatcgtcacccatgagccgggcgacgagttccgcttcaagggc
tcggtgacgaccggccgcttcgagcgtctcgacgtcgccggcacggcggacattccgctg
tcggagacgctgaagtcgtcgatcaccttcgccagcaaccatcgcgacggcttcgtcaag
cgcgtaccctacacccaggcgggcccctatgtgcaggaaccgaacacgctgtaccgcgag
gtcggctacgacagctccagccgcgaaggtggcgtcggcgactggtcgctacgcggcaag
ctgaaatgggaggcgtcctccagcctcaaggtcaccgtcaccggcgactattacaagcag
aacacctccggcctgccgaacatcgtcctcgacgtgctcgacgattatccgggcgacttc
gcggggccgggcgcgccgttggtgccgggttcggcgctgaccccgggcacgggctacaac
ttcgccggcctctataatttctgcatcaattcaactccggcccagatcatggggcgcaac
gcgcagtcgatctgcggcccgcgcggcaacgagctcaatccctcgacgatcctgccggcg
ctgggcagcgcaaatgtcgatgccgatcctagcaacaaccggctgccctatgacgatcgc
tgggtcagcacgaactggaaccgcagctacgccaccggcaacagcttcgcgcggtccaag
acctggggcttctccggcgcgctggactggagcctgtcgcccgacatcacgctgcggtcg
atcaccggctatcgcgagatggaatgggcgtcgggcttcgacggcgacaattcgccgatc
aacttcctccatgtctcgaactcggccaagcagcatcagttcagccaggaattccagctc
gtaggcgacaccgacaagctgggcggcaagctcaactatgtgctcggcgcctattatttc
agcgagaaggggagcgaggacggcttcgtcacgatcgggaccgggctcctccagatcgaa
gggccgatcgacgtcaagaaccggaacgtctccttcttcggccagctcgactggcgggtg
agcgacctgctggggttcacgctgggcgggcgctatacgtcggagaagaaggcgttcgac
gcgcggcagaccgactatgccgggttcagctatgacctgttcaactgtccggtgacggtg
gcgatctgccccggcatcctcggtttccccgatccgaacgatccgctgcgggtctatccg
cccaacacgccggaccgcaaattccacaatttctccccgaaattcggcgtgcagctccat
cccgacgacgatgtgatggtctatggttcctacaccatgggctataaggtcggcggctgg
agcacccggttgcagaatcccaccgcgaccgcgccgaccttcgacgacgagaaggcgaag
acgctcgagctcggcttgaagtcgacgctgctcgaccggcggctgcggttcaacgccgca
gtgttcaggacgatctacgacaacatccagctcctcttccagcgcggcaccaacccgctg
atcgagaatgccggcaaggccacgatcaagggcgccgaggccgacctgaccgcatcgatc
aacgactatctgagcctgacgatgtcggccggctatctcgacgccaagctgaccgaggtg
atcggcccgaccggccccgacagcgtccagctcggcacgagcgtcggcgcgcggctgccg
aaggtgccgaagttcaccttcaacctctcgccgcgcgtcaccttgccggtcggcgcgggc
gacgcgaagctggtcttccagggcgactatacccacacctcctcgatgtggaacgacgcc
cagcggaccttcctgctcaagcgcccgaccaccgacgtctttaacgccagcctgactttc
cggagcggccgcaactggtcggtgacgctcggcgggaccaatttgagcaacgagcgctat
gtcgtgaacggcgttgcccagaaggccggcggtctggtctatggttcgccaaatcgtccg
cgcgaatggtacgcccggctgggcgtggaattctaa
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