Rhizorhabdus wittichii RW1: Swit_3029
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Entry
Swit_3029 CDS
T00538
Name
(GenBank) putative transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi02020
Two-component system
swi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Swit_3029
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swit_3029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
swi03000
]
Swit_3029
Transcription factors [BR:
swi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Swit_3029
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
GntR
HTH_29
HTH_24
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABQ69379
UniProt:
A0A9J9LEM1
LinkDB
All DBs
Position
complement(3316782..3317468)
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AA seq
228 aa
AA seq
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MTEAIDPAPFDLLQWLPEVACADFHQMARRRGYAPGELIYSQGDQGGEMFRVVEGSVRLS
VTRTDGRELLYLLFEPGDCFGVSTLIDGEPLPQTAEAGRDLELQIVTKAAFDELRQRHRT
FDDALIRLATRHMRLLSGLFADASLQDMSARVASRILSVARSFGRPGDDGIELSIALSQT
ELAAMVGGARQTVNKVIMQFRRDGLLSIRNGRLVIHSTRALKSLASGR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagcgatcgaccccgccccgttcgacctgctgcaatggctgcccgaggttgcg
tgcgccgacttccaccagatggcgcgccgccgcggctatgcgcccggtgagctcatctac
agccagggagatcagggcggcgagatgttccgtgtcgtcgagggcagcgtgcgactttcg
gtgacccgcactgatggccgcgaacttctctatctgctgttcgaacctggcgactgcttc
ggcgtcagcaccctgatcgacggcgagccgctgccgcagaccgccgaggccggccgcgac
ctggaactgcagatcgtgacgaaggcggcgttcgacgaattgcgccagcgccatcgcacc
ttcgacgatgcattgatacggctcgcgacgcggcatatgcgcctgctgagcgggctattc
gccgacgccagccttcaggatatgagcgcgcgggtcgcaagccgcatcctgtcggtagcg
cggagtttcggccgtccgggtgacgacggcatagagctgtcgatcgccctcagccagacc
gaactcgccgcgatggtcggcggcgcacggcagaccgtcaacaaggtgatcatgcaattc
cgtagggatggtttgctcagtatccgcaacggccggttggtcatccactcgacccgcgcg
ctgaaaagcctcgcatcgggtcgctga
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