Rhizorhabdus wittichii RW1: Swit_3080
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Entry
Swit_3080 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3080
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
ABQ69430
UniProt:
A0A9J9HCX8
LinkDB
All DBs
Position
complement(3379582..3381714)
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AA seq
710 aa
AA seq
DB search
MKIIASALLLGTALSAGSVQAQATAGADGSDAYGDILVTANKTGATRLQDTPLAITAFSA
PALEATGIKDVRDLASLTPNLQVTQNASFSQVYIRGIGSNNVFGGSDPSSTIHLDGVYLA
RPASYLSNFLDVERIEVLRGPQGTLYGRNSVGGTINVISRKPTDEFAAKAQLTYGNYNFA
RAEGYVSGPLVKGKVDGSISLIGSRRDGYLKNVVPGIGDADNERTFGARGQLRFTPSEPL
EIILRGDYLHSNDALAGYVKLLQTTADPLANSVLGDYRKVALNIRPKANRKQSGAAAEIN
YDFGDAAKLKSLTAYRANRLVQAGDTDGTALNIRRTDQYEKQHQFSEELNLTGKFGGLTY
ILGAYYFDEHIDVDSTVTTFPTVRANFSPTINTKAWAGFAQGNYALTDQLSLTAGIRYTR
ERKRFDQVATNFDFATGLPLATYPRTYSTAGTYKAWTPKFGIEFRPTDGVLLFASATRGF
KSGGFNFASANPAQGFAPETLWSYEAGAKLDLFDRKLRLNGTYFHYDYKGLQVQSFLTPG
VIDITNASDATVDGVEIEAEAHPTDWLQLGANLAYLDAVYKNYTSALKPGNIVFDASGNR
LNLSPRWSYTLYAQADVPVGDGAFFARGEYSHRTRQYFTAINGGLDQQAGYGLINASIGY
TLPGDHIQFLLFGRNLADKEYVTSTASFASGIVGRVGEPRTYGIRAVFKY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaagattatcgcaagcgcgctactgctcggcaccgcactttcggctgggagcgtccag
gcacaggcaaccgcgggagcggacggttcggacgcctatggcgacatcctcgtcacggcc
aacaagacgggcgcgacccgcctgcaggacacgcccctcgcgatcaccgcgttcagcgcc
ccggcgctggaggcgaccgggatcaaggacgtgcgcgacctggcctcgctcacgccgaac
ctgcaggtgacgcagaatgcgtccttctcgcaggtctatatccgcggcatcggctcgaac
aacgtgttcggcggttcggacccatcgtcgacgatccatctcgacggcgtctatctggcg
cgccccgccagctatctctccaacttcctcgacgtcgagcggatcgaggtgctgcgcggg
ccgcagggcacgctctacggccgcaactcggtgggcggcacgatcaacgtcatcagccgc
aagccgaccgacgagttcgccgccaaggcccagctgacctacggcaactataatttcgcg
cgggccgagggctatgtcagcgggccgctggtcaagggcaaggtcgacgggtcgatctcg
ctcatcggcagccgccgcgacggctatctgaagaacgtcgtcccgggcatcggcgatgcg
gacaacgaacgcacgttcggcgcgcgcggccagctccgcttcaccccgtcggagccgctg
gagatcatcctgcgcggcgactatctccattcgaacgacgcgctcgcgggctatgtgaag
ctgctccagacgaccgccgatccgctggccaacagcgtgctgggcgattatcgcaaggtc
gcgctcaacatccgcccgaaggccaaccgcaagcaatcgggcgcggcggccgagatcaat
tacgacttcggcgacgccgccaagctcaagtcgctcaccgcctaccgcgccaaccggctc
gtccaggccggcgacaccgacggcacggcgctgaacatccgccgcaccgaccaatatgag
aagcagcatcagttctcggaggagctgaacctgacgggcaagttcggcgggctgacctat
atcctcggcgcctattatttcgacgagcatatcgacgtcgattccaccgtcaccaccttc
ccgacggtgcgggcgaacttctcgccgacgatcaacaccaaggcgtgggcgggcttcgcg
cagggcaattatgcgctgaccgaccagctcagcctgaccgcgggcatccgctatacccgc
gaacggaagcgcttcgaccaggtggcgaccaatttcgacttcgccaccgggctgccgctc
gccacctatccgcggacctattcgacggcgggcacctacaaggcgtggacgccgaaattc
ggtatcgagttccggccgaccgacggcgtgctgctgttcgcgtcggcgacccggggcttc
aagtcgggcgggttcaacttcgccagcgccaaccccgcgcagggcttcgcgccggagacg
ctgtggagctatgaagcgggcgccaagctcgacctgttcgaccgcaagctgcgcctgaac
ggcacctatttccactatgactacaagggcctgcaggtgcagtccttcctgacgccgggc
gtgatcgacatcaccaacgcgtccgacgccacggtcgacggcgtcgagatcgaggcggag
gcgcatccgaccgactggctgcagctcggcgcgaacctcgcttatctggatgcggtctac
aagaactacacctcggcgctcaaaccggggaacatcgtgttcgatgcgtcgggcaaccgg
ctgaacctgtcgcccagatggtcgtacaccctctatgctcaggccgacgtgccggtgggc
gacggcgccttcttcgcgcgcggcgaatatagccaccgcacccggcaatatttcacggcg
atcaacggcggcctcgaccagcaggccggctatgggctgatcaacgccagcatcggctac
acgctgccgggcgatcatatccagttcctgctgttcggccgcaacctcgccgacaaggaa
tatgtcaccagcacggcgagcttcgcgtccggcatcgtcggccgcgtcggcgaaccgcgc
acctacggcatccgggccgtgttcaaatattga
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