Rhizorhabdus wittichii RW1: Swit_3189
Help
Entry
Swit_3189 CDS
T00538
Name
(GenBank) TonB-dependent receptor, plug
KO
K16092
vitamin B12 transporter
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3189
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ69536
UniProt:
A0A9J9HD31
LinkDB
All DBs
Position
complement(3498554..3500425)
Genome browser
AA seq
623 aa
AA seq
DB search
MRTFTTSLIAALAILPGTAHAEEADADSIVVTATRTETKLSEVGKSISVIDAATIEQRQT
VPLADLLRTLPGVTIQRNGGLGTITSVFIRGAQSDQTVALIDGIKLNDPSAPGGGFNFAD
LLTDNLERIEVLRGPQSVLWGSQAIGGVINLITREPTDRFEVRATGEYGRYETGRLSGAV
SGKVGPTAISAGAGYLTTDGISVADSGTEKDGYHLFGAHLKTTTELTEQLSLDLRGFYTK
SKVDLDGFPAPNYTLADTDEYQRQQQIVGYAGLNANLFDGRFRNRFAAAFTRIDRDSYDP
AAAPVKNFDARGRNLRFEYQGIAELGLVRATFGAEHQEEKLRTISAYFGPPVTARAKANI
DSAYLDLHARPIEGLNLGAGVRYDDHSQFGDATTASADLAYSPNGGSTTLRASYGEGFKA
PSLYQLYGDYGFRDLRPEKAKGWDAGIAQKLISEAVELRATWFQRNTTNLIDFDLGTFTY
ANIARARARGVEAELRIAPTSELLFTANYSFTNARNRERTDPNFGRQLARRPRQTVNVTG
DYRWPFGLTTGATITHVSRSFDDAANRNRLGDYVLVDLRAALPLTEAIELYGRIENLFDE
RYQTAAGYGQLGRAATAGVRFRY
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcggactttcaccacatcgctgatcgcggccctggcgatattgccgggcacggcccac
gccgaggaggccgacgccgacagcatcgtcgtcaccgccacccgcaccgagacgaagctg
tccgaggtcggcaagtcgatctcggtgatcgacgccgccacgatcgagcagcgccagacc
gtgccgctcgccgatctgctgcggacgctgccgggcgtgacgatccagcgcaacggcggc
ctcggcaccatcaccagcgtgttcatccgcggcgcccagtcggaccagacggtggcgctg
atcgacgggatcaagctcaatgacccgtcggcgccgggcggcggcttcaacttcgccgac
ctgctgaccgacaatctcgagcggatcgaggtgctgcgcgggccgcagtcggtgctgtgg
ggcagccaggcgatcggcggcgtgatcaacctgatcacccgcgagccgaccgaccggttc
gaggtgcgggcgaccggcgaatatggccgctacgagaccggccgcctgtcgggcgcggtc
agcggcaaggtcggcccgaccgcgatcagcgccggcgcgggctacctgaccaccgacggc
atctcggtcgccgacagcggcacggagaaggacggctatcacctgttcggcgcgcatctc
aagacgacgaccgagctgaccgagcagctctcgctcgacctgcgcggcttctatacgaag
agcaaggtcgacctcgacggcttcccggcgccgaactacaccctcgccgacaccgacgaa
tatcagcgccagcagcagatcgtcggctatgccgggctcaacgccaacctgttcgacggc
cgcttccgcaaccgcttcgccgccgccttcacccggatcgaccgcgacagctacgacccg
gcggcggctccggtgaagaatttcgacgcgcgcgggcgcaacctgcgcttcgaatatcag
ggcatcgccgagttggggctcgtccgggccaccttcggcgccgagcatcaggaggagaag
ctccgcacgatcagcgcctatttcggcccgccggtgacggcgcgcgccaaggcgaacatc
gacagcgcctatctcgacctccacgcccggccgatcgagggcctcaacctcggcgccggg
gtccgctacgacgaccacagccagttcggcgacgcgacgacggccagcgccgacctcgct
tattcgccgaacgggggatcgaccaccctccgcgccagctatggcgagggcttcaaggcg
ccgtcgctctaccagctctacggcgactacggcttccgcgacctgcggcccgaaaaggcc
aagggctgggacgccggcatcgcccagaagctgatcagcgaggcggtcgagctgcgcgcg
acctggttccagcgcaacacgaccaacctgatcgacttcgacctgggcaccttcacctac
gccaatatcgcgcgggcgcgggcgcgcggcgtcgaggccgagctgcgcatcgcgccgacc
agcgagctgctgttcaccgcgaactacagcttcaccaacgcccgcaaccgcgagcggacc
gatcccaatttcggccgccagctcgcccggcggccgcgccagacggtgaacgtgaccggc
gactatcgctggccgttcggcctgaccacgggcgccacgatcacccatgtctcgcgcagc
ttcgacgatgccgccaaccgcaaccggctcggcgactatgtgctcgtcgacctgcgcgcg
gcgctgccgctgaccgaggcgatcgagctctacggccggatcgagaatctgttcgacgag
cgctaccagaccgccgccggctatggccagctcggccgggcggcgacagccggtgtccgc
ttccgctactag
DBGET
integrated database retrieval system
