Rhizorhabdus wittichii RW1: Swit_3206
Help
Entry
Swit_3206 CDS
T00538
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Swit_3206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_3206
Enzymes [BR:
swi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Swit_3206
DNA repair and recombination proteins [BR:
swi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Swit_3206
Prokaryotic type
Swit_3206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABQ69553
UniProt:
A0A9J9HD49
LinkDB
All DBs
Position
complement(3523206..3523991)
Genome browser
AA seq
261 aa
AA seq
DB search
MDACLRRHDGRMRLNPRPSCATNPAMAGDIKLHDSWRDPLAEEFSSPYMAALREFLMGER
AKGKRIFPVASDWFRALDLTPLDKVRVVILGQDPYHGLGQAHGLCFSVRPGVAPPPSLVN
IYKELDSDLGIARPAHGFLEHWARQGVLLLNSVLTVEMGIAASHRDRGWEKFTDAIIRLV
NAKPDPVVFMLWGSYAQKKAAFVDSTDRGGRHLVLKAPHPSPLSAHNGFFGCKHFSKANA
FLAEHGMAPIDWALPPVEAAA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctgcctccgcaggcatgacgggagaatgagattgaacccccggccaagctgc
gccacaaacccagccatggcgggcgacatcaaactccacgacagctggcgcgatcccctg
gcggaggaattctcctccccctatatggccgcgctgcgcgaattcctgatgggcgagcgg
gcgaagggcaagcgcatcttcccggtcgccagcgactggttccgcgcgctcgacctcact
ccgctcgacaaggtccgcgtcgtgatcctgggacaggacccctatcacggcctcggccag
gcgcacggcctgtgcttcagcgtccggcccggcgtcgcgccgccgcccagcctggtcaac
atctacaaggaactcgacagcgatctcggcatcgcccggcccgcgcacggcttcctcgaa
cattgggcgcggcagggggtgctgctgctcaattcggtgctgacggtcgagatggggatc
gccgcctcgcaccgcgaccgggggtgggagaagttcaccgacgcgatcatccggctggtc
aacgccaagcccgatccggtcgtgttcatgctgtggggcagctatgcccagaagaaggcg
gcgttcgtcgattcgaccgaccgcggcggccgccacctcgtgctgaaggcgccgcacccc
tcgccgctgtcggcgcacaacggcttcttcggctgcaagcatttctccaaggccaacgcc
ttcctcgccgagcacggcatggccccgatcgactgggcgctgccgccggtcgaagcggcg
gcctga
DBGET
integrated database retrieval system
