Rhizorhabdus wittichii RW1: Swit_3225
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Entry
Swit_3225 CDS
T00538
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16090
catecholate siderophore receptor
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3225
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
POR_N
Motif
Other DBs
NCBI-ProteinID:
ABQ69571
UniProt:
A0A9J9HD98
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All DBs
Position
complement(3543123..3545534)
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AA seq
803 aa
AA seq
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MIDRDRTGSSFLALACIGFITSAPAAAQTAEKAPDGEKRLGGMTVSATAIDEATPKVERP
ESPKYTRPLLDTPQTITVINKATIQQQNLLTLRDVLSTVPGITFGAGEGGFGYGDRIILR
GQDAKNDVTVDGVRSGAFLNRNEVYNIEQVEVTNGANSVMNGGGSVAGTINLVTKRPLAD
DQTVLSAGVGTDNYYRATVDANRRLSDLIAVRINAVYHENDVPGRDVEDYKRWGIAPAIT
IGIDGPTSLTLQAEHLDDKAMPQYGLRYYANNGGFLDDFDRSGYYGFANLDQQNSKTNAL
QAIFSHAFSDKVSIRNLTRYEKIRQNTITSQPNGTFCLASTGLQPLDINGVAAACPATVP
AGYYLPTGGRGVQRFITNETHYSQTDLSANFDTGGIEHSLVIGVSALWEDYHQKQGTLPR
NADGSTPAFPLVSISNPEATVQGPAGFTYGNNTYNGPINFILSSRNVGTQRSYAAYLFDT
VKFADWFEINGGVRYEDVKGSSRTLSYVTTAGAANLGDLSAATGPFNFGDKLFSYRVGAV
VKPTPNTSLYVAYGNSKLPSKASVDGACTAANCRLKPETTENYEIGAKADLFDARLLLTA
AIFRNERNSIKVNSNDPTLPDQTLDGGQRVEGLSLGASGNITSNWTISANYMYLKSKILQ
GVSNFCVANPGATGCGNSAAFPDPTRGYSLTNTPKHSGSLFTTYRFDFGLELGYGLTHQG
SFLLNQPTLAQLTAGNYVGYRVPSYTIHRFMAAYPITPQLKAQVNVQNFTNEKYVTTVRN
SVGGSWAQPAPTRSAVFSLNYQF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacagggataggacgggcagcagctttctggcgctggcctgcatcggtttcatc
accagcgcgccggcggcggcacagaccgcggagaaagccccggacggcgaaaagcggctc
ggcggcatgaccgtcagcgcgaccgcgatcgacgaggcgacgccgaaggtcgagcggccg
gaatcgcccaaatatacccgaccgctgctcgacacgccgcagaccatcaccgtcatcaac
aaggcgacgatccagcagcagaacctgctgacgctgcgcgacgtgctcagcaccgtgccg
ggcatcaccttcggcgccggcgaaggcggcttcggctatggcgaccgcatcatcctgcgc
ggccaggacgccaagaacgacgtcaccgtcgacggcgtccgctcgggcgccttcctcaac
cgcaacgaggtctacaatatcgagcaggtcgaggtgaccaacggcgccaattcggtgatg
aacggcggcggctcggtcgcgggcacgatcaacctggtgaccaagcgcccgctggccgac
gaccagaccgtgctgagcgccggcgtcggcaccgacaattattaccgcgcgaccgtcgac
gccaaccggcggctcagcgacctgatcgcggtgcggatcaatgcggtctatcacgagaac
gacgtgcccggccgcgacgtcgaggattacaagcgctggggcatcgccccggcgatcacc
atcggcatcgacgggccgaccagcctgaccctccaggccgagcatctcgacgacaaggcg
atgccgcaatatggcctgcgctattatgccaataatggcggcttcctcgacgatttcgac
cgtagcggctattatggcttcgccaatctcgaccagcagaacagcaagaccaacgcgctg
caggcgatcttcagccacgcgttcagcgacaaggtgagcatccgcaacctcacccgctac
gagaagatccgccagaacacgatcaccagccagccgaacggcaccttctgcctggcgtcg
accgggctgcagccgctggacatcaacggcgtcgccgccgcctgcccggccaccgtgccc
gcgggctattacctgcccaccggcggccgcggcgtgcagcgcttcatcaccaacgagacc
cactatagccagaccgacctcagcgccaatttcgacaccggcggcatcgagcattcgctg
gtgatcggcgtctcggcgctatgggaggattatcatcagaagcagggcacgctgccgcgc
aacgccgacggatcgaccccggccttcccgctggtcagcatctccaacccggaggcgacc
gtccagggcccggccggcttcacctatggcaacaacacctataacggcccgatcaacttc
atcctgtcgagccgcaacgtcggcacgcagcggagctatgccgcctatctgttcgacacg
gtgaagttcgccgactggttcgagatcaacggcggcgtccgctacgaggacgtcaaggga
tcgagccggacgctcagctacgtcaccacggcgggggccgccaatctcggcgacctcagc
gcggcgaccggcccgttcaacttcggcgacaagctcttctcctaccgcgtcggcgcggtg
gtgaagccgacgccgaacaccagcctctacgtcgcctatggcaattcgaagctgccgtcc
aaggcctcggtcgacggcgcctgcaccgccgccaattgccgcctgaagccggagacgacc
gagaattacgagatcggcgccaaggccgacctgttcgacgcccggctgctgctgaccgcc
gccatcttccgcaacgagcgcaactcgatcaaggtcaactcgaacgatccgaccctgccc
gaccagacgctggacggcggccagcgggtggagggcctgtcgctcggcgcgtcgggcaac
atcaccagcaactggacgatctcggccaactacatgtacctgaagtcgaagatcctgcag
ggcgtgtcgaacttctgcgtcgccaatccgggggcgacgggctgcggcaacagcgccgcc
ttccccgatccgacgcgcggctattcgctgaccaacacgccgaagcattcgggcagcctg
ttcaccacctaccgcttcgacttcgggctggagctgggctacggcctgacccaccagggc
agcttcctgctcaaccagccgacgctcgcgcagctcaccgccggcaactatgtcggctat
cgggtgccgagctacacgatccaccgcttcatggcggcctatccgatcacgccgcagctc
aaggcgcaggtgaacgtccagaacttcaccaacgagaaatatgtgacgaccgtgcgcaac
tccgtcggcggcagctgggcacagcccgcgccgacccgctcggcggtgttcagcctgaac
tatcagttctga
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