Rhizorhabdus wittichii RW1: Swit_3281
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Entry
Swit_3281 CDS
T00538
Name
(GenBank) TonB-dependent receptor, plug
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3281
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3281
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF5125
SoxY
Motif
Other DBs
NCBI-ProteinID:
ABQ69627
UniProt:
A0A9J9HDP5
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Position
complement(3610699..3613092)
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AA seq
797 aa
AA seq
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MRFTITALALAGVSLFATTAAAQTAPAAADSEGVNGLQEIVVTAQRRAESLQKVPVAVTA
ISAEQIDDLRVTNVKNLAGLAPSLQIQNQGLQSNPSIAIRGVASGVSNNAVDPKVGIYLD
GVYIGRTVGSIFDLADIQRVEVLRGPQGTLFGRNATSGAISLVSAEPTGEFGVRATGSYG
NGEAIRGKAVINLPAFGPFSVKLAYLHDQIDGDYTNLIGGKTINLALRDPRFGTETFARK
LGRRNIDGGQLAIRGEFGNLTADYRFDYTDARTTGRAIQSLGVIPDSSGALLQPIVDLQP
FFGGVTNIAPNARLSAVANATSEEHVVTQGHSLTLAVKPNDLVTVKSITAYRKFRQDPNI
YDLAASGGLRFTFGQLGALITPGLTPAQIQAALFNPANIPGPNDYFFSLLTARKTSQKQF
SQEFQIQLDGEHYELTAGAFYFHERSPATDILGILEPIPGGLVVPSPLDAAFGSGVTDTV
SINDSWAGYGQLTVHLGDRVDVTGGLRYTIDDRDLAINAISGGQGGQLGVGKYNVSFKKL
NYTGILTWRPTDQATAYAKISSGYVAGGILSGIPYKPETLVSYELGAKTQMFDNRVRLNV
AAFYSDYKDLQTQNFINGRQFFDNAGKASIKGFEVEADVIPVRGLVLSGNVGYADLNYKT
FILNGIDVADVARTTYNSKWTARVAAQYDAPEFANGSHLQGRIEGRYRSSYYLTSTPFVN
LTGQVVLENENRQPGYWLVDGRFGLVDIPIGGTKASLSAFGQNLFDKQYISFGAPVLSLV
GSYERGRTYGVELGFAF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcaccataaccgcgctggcgctggccggcgtgtccctgttcgccaccaccgct
gccgcccagaccgcccccgcagccgccgactccgaaggggtcaacggcctgcaggagatc
gtcgtgaccgcgcagcgccgcgcggaaagcctgcagaaggtccccgtcgcggtcaccgcg
atcagcgccgaacagatcgacgacctgcgcgtcaccaatgtgaagaacctcgccggcctc
gcgccgagcctccagatccagaaccagggcctccagagcaacccgtcgatcgcgatccgc
ggcgtcgcctcgggcgtgtcgaacaacgcggtcgatcccaaggtcggcatctatctcgac
ggcgtctatatcggccgcaccgtcggctcgatcttcgacctcgccgacatccagcgggtc
gaggtgctgcgcggtccgcagggcacgctgttcggccgcaacgcgaccagcggcgcgatc
agcctggtcagcgccgagccgaccggcgagttcggcgtccgcgccaccggctcctacggc
aatggcgaggcgatccgcggcaaggcggtgatcaacctgcccgccttcggccccttctcg
gtcaagctggcctatctgcacgaccagatcgacggcgactacaccaacctgatcggcggc
aagacgatcaacctggcgctgcgcgacccgcgcttcggcaccgagaccttcgcgcgcaag
ctcggccgccgcaacatcgacggcggacagctcgccatccggggcgagttcggcaacctc
accgccgattatcgcttcgactataccgacgcccgcaccaccggccgcgcgatccagagc
ctgggcgtgatccccgattcgtcgggcgcgctgctccagccgatcgttgacctgcagccc
ttcttcggcggcgtcaccaacatcgcccccaacgcccggctgtccgcggtcgccaatgcg
acgagcgaggagcatgtcgtgacgcagggccacagcctgaccctggcggtgaagccgaac
gacctggtgacggtgaagagcatcaccgcctatcgcaagttcaggcaggacccgaacatc
tacgacctcgccgcctcgggcgggctgcgcttcaccttcgggcagctcggcgcgctgatc
accccgggcctcaccccggcgcagatccaggcggcgctgttcaacccggccaacatcccc
gggccgaacgactatttcttctcgctgctcaccgcgcgcaaaaccagccagaagcagttc
agccaggagttccagatccagctcgacggcgagcattatgagctgaccgccggcgccttc
tatttccacgagcgctcgcccgcgaccgacatcctcggcatcctcgaaccgatccccggc
ggcctggtggtgccgagcccgctcgacgcggcgttcggcagcggcgtcaccgacacggtg
tcgatcaacgattcctgggcgggctacggccagctcaccgtccatctcggcgatcgcgtc
gacgtcaccggcgggcttcgctacacgatcgacgaccgcgacctcgcgatcaacgccata
tcgggcggccagggcggccagctcggcgtcggcaagtacaatgtcagcttcaagaagctc
aactataccggcatcctgacctggcggccgaccgaccaggccaccgcctatgccaagata
tcgagcggctatgtggcgggcggcatcctcagcggcatcccctacaagccggagacgctg
gtctcctacgagctgggcgccaagacgcagatgttcgacaaccgcgtccgcctgaacgtc
gcggccttctacagcgactacaaggacctgcagacgcagaacttcatcaacggccgccag
ttcttcgacaatgccggcaaggcgtcgatcaagggcttcgaggtcgaggccgacgtcatc
ccggtgcgcggcctcgtgctcagcggcaatgtcggctacgccgatctcaactacaagacg
ttcatcctgaacgggatcgacgtcgccgacgtggcgcgcaccacctacaactcgaaatgg
acggcgcgggtcgcggcgcaatatgacgcgccggaattcgcgaacggcagccatctgcaa
ggccggatcgagggccgctatcgcagcagctactatctcacctcgacgccgttcgtgaac
ctgacgggccaggtcgtgctggagaacgagaaccgccagcccggctactggctggtcgac
gggcgcttcgggctggtcgacatcccgatcggcgggaccaaggcgtcgctctcggccttc
ggccagaacctgttcgacaagcagtatatctcgttcggcgcgccggtgctgtcgctggtc
ggcagctatgagcgcggccgcacctatggcgtcgaactgggtttcgccttctga
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