Rhizorhabdus wittichii RW1: Swit_3376 Help Entry Swit_3376         CDS       T00538                                  Name (GenBank) chaperonin GroEL   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism swi  Rhizorhabdus wittichii RW1 Pathway swi03018   RNA degradation Brite KEGG Orthology (KO) [BR:swi00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Swit_3376  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:swi03019]     Swit_3376    03110 Chaperones and folding catalysts [BR:swi03110]     Swit_3376    03029 Mitochondrial biogenesis [BR:swi03029]     Swit_3376   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:swi04147]     Swit_3376 Enzymes [BR:swi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      Swit_3376 Messenger RNA biogenesis [BR:swi03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      Swit_3376 Chaperones and folding catalysts [BR:swi03110]  Heat shock proteins   HSP60 / Chaperonin    Swit_3376 Mitochondrial biogenesis [BR:swi03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     Swit_3376 Exosome [BR:swi04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    Swit_3376   Exosomal proteins of other body fluids (saliva and urine)    Swit_3376   Exosomal proteins of breast cancer cells    Swit_3376   Exosomal proteins of colorectal cancer cells    Swit_3376   Exosomal proteins of bladder cancer cells    Swit_3376 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-ProteinID:  ABQ69722 UniProt:  A5VBQ6 LinkDB All DBs Position 3704215..3705864 Genome browser AA seq 549 aa AA seqDB search MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI ELKDKFENIGAQLVREVASKTNDLAGDGTTTATVLAQAIVREGLKSVAAGMNPMDLKRGI DLAVTKVVENLKARSKPVAGSNEVAQVGIISANGDKEVGEKIAEAMDKVGKEGVITVEEA KGLEFELDVVEGMQFDRGYLSPYFITNPEKMQVELTDPYILIHEKKLSNLQSILPILEAV VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTNGEL ISEDLGIKLENVTIGMLGTAKRVTIDKDNTTIVDGAGAADAIKGRVEAIRKQIEITTSDY DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL YATKALDGLKGANDDQTRGIDIIRRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFN AATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPAMPGGGMGG MGGMGGMDF NT seq 1650 nt NT seq  +upstreamnt  +downstreamnt atggcagcgaaagacgtcaagttttcgcgcgacgcccgtgagcgcatcctgcgcggcgtc gacatcctcgccgacgcggtgaaggtcacgctgggcccgaagggccgcaacgtcgtcatc gacaagtcgttcggcgccccgcgcatcaccaaggacggcgtcaccgtcgccaaggaaatc gagctgaaggacaagttcgagaacatcggcgcgcagctcgtccgcgaagtcgcctcgaag accaacgacctggccggcgacggcaccaccaccgccaccgtgctcgcccaggcgatcgtc cgcgagggcctgaagtcggtcgcggccggcatgaacccgatggacctgaagcgcggcatc gacctcgccgtcaccaaggtcgtcgagaacctcaaggcccgctcgaagccggtcgccggc tcgaacgaagtcgcccaggtcggcatcatctcggccaatggcgacaaggaagtcggcgag aagatcgcggaagcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaggaggcc aagggcctcgagttcgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacctc tcgccctacttcatcaccaacccggagaagatgcaggtcgagctgaccgacccgtacatc ctcatccatgagaagaagctgtcgaacctgcagtcgatcctgccgatcctcgaggcggtc gtgcagtcgggccgtccgctgttgatcatcgccgaggacatcgagggcgaggcgctggcc accctggtcgtcaacaagctgcgcggcggcctgaaggtcgcggccgtcaaggcgccgggc ttcggcgatcgccgcaaggcgatgctcgaggacatcgcgatcctgaccaacggcgagctg atctccgaggatctcggcatcaagctcgagaacgtcaccatcggcatgctcggcaccgcc aagcgcgtcacgatcgacaaggacaacaccaccatcgtcgatggcgccggtgcggccgat gcgatcaagggccgcgtcgaggcgatccgcaagcagatcgagatcaccacgtccgactat gaccgcgagaagctccaggagcgcctggccaagctcgccggcggcgtcgccgtcatcaag gtcggcggtgcgaccgaggtcgaagtgaaggagcgcaaggaccgcgtcgacgacgcgctg cacgcgacccgcgcggccgtcgaggaaggcatcgtccccggtggcggcaccgccctcctc tatgcgaccaaggcgctcgacggcctcaagggcgcgaacgacgaccagacccgcggcatc gacatcatccgtcgcgccatctcggctccggtcaagcagatcgcccagaacgccggccag gacggcgcggtcgtcgccggcaacctgctgcgcgagaatgacgagaccaagggcttcaac gccgcgaccgacgtctatgagaacctcgtcgccgccggcgtgatcgacccgaccaaggtc gtccgcaccgcgctgcaggacgcggcctcggtcgccggcctgctcatcaccaccgaggcg acgatcgccgagctgcccgaggacaaggccccggccatgcccggcggcggcatgggtggc atgggcggcatgggcggcatggacttctaa

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