Rhizorhabdus wittichii RW1: Swit_3542
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Entry
Swit_3542 CDS
T00538
Name
(GenBank) protein of unknown function DUF853, NPT hydrolase putative
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_3542
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
Swit_3542
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
ResIII
FtsK_SpoIIIE
AAA_22
Hydrolase
AAA_16
TrwB_AAD_bind
AAA_30
CbiA
T2SSE
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABQ69888
UniProt:
A0A9J9LFE1
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Position
3901764..3903395
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AA seq
543 aa
AA seq
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MIDEQGIFLGASPNPSGLLPQHLNLRRANRHGLIAGATGTGKTVTLQGIAENFSAAGVPV
FLADVKGDLSGISMAGSPTAKNADKLVARAAEIGLQNYSWGDNPAIFWDLYGEQGHPIRT
TISEMGPLLLARLMNLNEVQEGVLNIAFRYADEQSLLLLDLGDLQAMLAHCAEHADELST
KYGNVTKASVGSIQRQLLQLDSQGGAHFFGEPALDIHDFLGVDDQGRGYVNVLAADKLMQ
SPKLYATFLLWLLSELFENLPEVGDPDKPKLVFFFDEAHLLFEDAPKALTDKIEQVVRLI
RSKGVGVYFVTQNPIDVPEDVAAQLGNRVQHALRAFTPRDQKAISAAADTFRINPDLDVA
KAIIELKVGEALVSVLQDDGSPSIVQRTLIAPPRSRLGPVDAKERAVIQSISPVAGKYDT
VIDRESAEELLAAKADAAVAAAQAAQAQAEADKTAAIQAKMEAKQREAALKEQARQDAIA
AREAAKPSGLDRALQSATRAAASSVGRQVANELGRAVFGGSSRRSSGGIAGQLVRGILGG
LFK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgagcagggcatcttcctcggcgcgagcccgaacccgtcgggattgctgccc
cagcatctcaatctccgccgcgccaaccgccacggcctgatcgccggcgcgaccggcacc
ggcaagaccgtcaccctgcaaggcatcgccgagaatttctcggcggccggcgttccggtg
ttcctggccgacgtgaagggtgatctttcgggcatctcgatggccgggtcgccgaccgcg
aagaatgccgacaagctggtcgcgcgcgccgccgagatcggcctgcagaactatagctgg
ggcgacaacccggcgatcttctgggatctctatggcgagcagggccacccgatccgcacc
accatatcggaaatggggccgctgctgctcgcccggctgatgaacctcaacgaggtccag
gaaggcgtgctcaacatcgccttccgctatgccgacgagcagagcctgttgctgctcgac
ctcggcgacctgcaggcgatgctcgcccattgcgccgagcatgccgacgagctgtcgacc
aagtacggcaacgtcaccaaggcgagcgtcgggtcgatccagcgccagctcctccagctc
gacagccagggcggcgcgcatttcttcggcgagccggcgctcgacatccacgacttcctc
ggcgtcgacgaccaggggcgcggctatgtcaacgtgctggcggccgacaagctgatgcag
agcccgaagctctacgccaccttcctgctgtggctgctgagcgagctgttcgagaatctt
cccgaggtcggcgatcccgacaagcccaagctggtcttcttcttcgacgaggcgcacctg
ctgttcgaggatgcgcccaaggcgctgaccgacaagatcgagcaggtcgttcgcctgatc
cggtcgaagggcgtcggcgtctatttcgtcacccagaacccgatcgacgtgcccgaggac
gtcgccgcccagctcggcaaccgcgtccagcacgcgctacgcgccttcaccccgcgcgac
cagaaggcgatctcggccgccgccgacaccttccggatcaaccccgacctcgacgtcgcc
aaggcgatcatcgagctgaaggtgggcgaggcgctcgtctcggtgctgcaggacgacggc
tcgccgagcatcgtccagcgcaccctgatcgcgccgccgcgctcgcggctggggccggtc
gacgcgaaggagcgcgccgtgatccagtcgatctctccggtcgccggcaaatatgacacg
gtgatcgaccgcgaatcggccgaggaactgctcgccgccaaggccgacgccgcggtcgcc
gccgcgcaggccgcccaggcgcaggccgaggccgacaagaccgccgccatccaggcgaag
atggaggcgaagcagcgcgaggccgcgctcaaggaacaggcgcggcaggatgcgatcgcg
gcgcgcgaggcggcgaagccgagcggcctcgaccgcgcgctccagtcggcgacccgcgcg
gcggcttcctcggtcggacgccaggtcgccaacgagctcggccgcgccgtgttcggcggc
agcagccggcgcagctcgggcgggatcgcgggccagctggtgcgcggcatcctcggcggc
ctcttcaagtga
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