Rhizorhabdus wittichii RW1: Swit_3580
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Entry
Swit_3580 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3580
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Ribosomal_S19e
Motif
Other DBs
NCBI-ProteinID:
ABQ69926
UniProt:
A0A9J9HDS7
LinkDB
All DBs
Position
3942286..3944793
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AA seq
835 aa
AA seq
DB search
MSLQERSAVNIQGHLPVSSRHDPRLPASRRRAPNKARLYLGLASIGLLGWQNPAQAEDQP
DEQDSIVVVGSRSGNARALESSAPIQVVGGDTLRDTGSRTLSEALQRTVPSFNFPTSVPS
SNAASFVKGVSLRGLAADQTLVLINGKRRHATAQLNAGGGTTKGAQTVDLNSIPLSAVER
VEVLLDGASAQYGSDAVAGVVNIVLKQGSEGGDIALLYGINDKGDGKTKSVEGSFGLKLP
GDGFVRFAFDAWDIGRTRLSVPDTRQMYFAGDPREASYPNRDWFYGSGATKRQNIFINGE
TTVGGVTFYAQGSYGWRKDEGFGNLRQPNSDQTVRALFPDGFQPFLHIRSRDAAAAVGGR
WGSAAAGDFDLSANYGRNRVKSVVSNTNNASLGTASPTAFDTGDLLNEQTNVNFDWKRPF
AVAFLPTPLNVAAGLTYRHEAYEVFEGDYGSWANGGVPILDGPNAGKVATPASQGFGGFS
PDDAGRLSRNVYGGYLELENSPTEKLRITLSGRFEHYSDFGSTTNVRLATRYELTPTLAW
RFSAGTGYRAPSLGQSAYSRTIPNITNGVLATNRLARVDSVEARALGATALKPEKSVNLS
TGWVWTPSPAFSATLDVYQISIDDRIVLSETLTGALVRQVLANAGFPTYSGLQYFTNAVD
TRTRGIDATARYRFNLASGARLDLSAGFNWNETKITHVKDTPAVLSGSGLVLIGREASSL
IEEANPDTFLRLAADYGAGPFEAHLSGVRYGVYRTRHTSNPAFDQRYGPQVVVNIAAGYA
LFEGVKLSAGVNNLFGSHPDKVLTAIRNPVVSVYSGLSPEGGAGRTYFARLGYSF
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcaagaaagatccgccgtgaacatccaaggacatctacccgtctcctcccgc
cacgatccgcgccttcccgcgtcgcggcggcgggcgccgaacaaggcccgcctctatctg
ggcctggcgtcgatcggactgctgggctggcagaacccggcgcaggccgaggaccagccg
gacgagcaggactcgatcgtggtcgtcggctcgcgcagcggcaatgcccgcgcgctcgaa
agctccgcgccgatccaggtcgtcggcggcgacaccctgcgcgacaccggatcgcggacc
ctgtcggaagcgctgcagcggaccgtgccctcgttcaacttcccgacctcggtgccgtcg
tcgaacgccgccagcttcgtcaagggcgtgtcgctgcgcggcctcgccgccgaccagacg
ctggtgctgatcaacggcaagcgccgccatgcgacggcgcagctcaacgccggcggcggc
acgaccaagggcgcccagacggtcgacctcaacagcatcccgctgagcgcggtggagcgg
gtcgaggtgctgctcgacggcgcgtcggcgcaatatggatcggacgcggtcgccggcgtc
gtcaacatcgtcctgaagcagggcagcgagggcggcgacatcgcgctgctctacggcatc
aacgacaagggcgacggcaagaccaagagcgtcgagggatcgttcggcctgaagcttccg
ggcgacggcttcgtccgcttcgccttcgacgcgtgggacatcgggcgcacccgcctgtcg
gtgcccgacacccgccagatgtatttcgccggcgacccgcgcgaggcgagctatccgaac
cgcgactggttctacggcagcggcgcgaccaagcggcagaacatcttcatcaacggcgag
accaccgtcggcggggtgaccttctacgcgcagggcagctatggctggcgcaaggacgag
ggcttcggcaatcttcgccagcccaattccgaccagacggtgcgcgctctgttcccggac
gggttccagcccttcctccacatccggtcgcgcgacgccgccgccgccgtgggggggcgc
tggggctcggccgccgcgggcgatttcgacctgagcgccaattacggccgcaaccgggtc
aagagcgtggtgtcgaacaccaacaacgccagcctcggcaccgccagcccgaccgcgttc
gacaccggcgacctgctgaacgagcagaccaacgtcaacttcgactggaagcgcccgttc
gccgtggcgttcctgccgaccccgctcaacgtcgccgccggcctgacctatcggcacgag
gcctatgaggtgttcgagggcgactatggctcctgggccaatggcggcgtgccgatcctc
gacggccccaatgcgggcaaggtggcgacgccggcttcgcagggcttcggcggcttctcg
cccgacgatgccgggcgcctctcccgcaatgtctatggcggctatctggagctggagaat
tcgccgactgagaagctgcggatcaccctgtcgggccggttcgagcattattcggacttc
ggatcgaccaccaacgtccggctggcgacccgctacgagctcacgccgacgctggcgtgg
cggttcagcgcgggcaccggctatcgcgcgccgtcgctgggccagtcggcctattcgcgc
accatcccgaacatcaccaacggcgtgctcgccaccaaccgcctcgcccgggtcgacagc
gtggaggcccgcgcgctgggcgcgacggcgctcaagcccgaaaagtcggtcaacctgtcg
accggctgggtatggacgcccagcccggccttctcggcgacactggacgtctaccagatc
agcatcgacgaccggatcgtcctgtcggagacgctgaccggggcgctggtccgccaggtg
ttggccaatgccggcttcccgacctattcgggcctgcaatatttcaccaacgcggtcgac
acccggacccgcggcatcgacgccacggcccgctaccggttcaatctggcgtcgggcgcc
aggctcgacctgagcgccggcttcaactggaacgagaccaagatcacccacgtcaaggac
acgcccgccgtgctgagcggcagcgggctcgtcctgatcgggcgcgaggcctcgtcgctg
atcgaggaggcgaaccccgataccttcctgcggctggcggccgactatggcgcggggccg
ttcgaggcccatctctccggcgtgcgctacggcgtctaccggacccgccacaccagcaac
ccggccttcgaccagcgctacggcccgcaggtcgtggtcaatatcgccgccggctacgcg
ctgttcgagggggtcaagctgtcggccggcgtcaacaacctgttcggcagccatcccgac
aaggtcctgaccgcgatccgcaacccggtcgtctcggtctattcgggcctgtcgcccgag
ggcggcgccggccgcacctatttcgcccgcctcggttattccttctga
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