Rhizorhabdus wittichii RW1: Swit_3620
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Entry
Swit_3620 CDS
T00538
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00300
Lysine biosynthesis
swi01100
Metabolic pathways
swi01120
Microbial metabolism in diverse environments
swi01230
Biosynthesis of amino acids
Module
swi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Swit_3620
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
swi01002
]
Swit_3620
Enzymes [BR:
swi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Swit_3620
Peptidases and inhibitors [BR:
swi01002
]
Metallo peptidases
Family M20
Swit_3620
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ABQ69966
UniProt:
A5VCF0
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Position
3978475..3979608
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AA seq
377 aa
AA seq
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MIDPLDLTQRLIACPSVTPADAGAMAVIATALESIGFTVHRFAAGEAPDGPVENLFAIRG
QGGPHFAFAGHSDVVPPGDGWTSDPFVPEIRGELLHGRGAVDMKGAIAAFIAAAARLGDH
PGTISLIITGDEEGPATFGTVALIDWMKARGLCPDLCLVGEPTSTHRLGDMVKIGRRGSV
NMWIENVGTQGHVAYPHLAANPIPALVKALDALAALHLDDGNAWFQPSNLEITTVDVGNA
ATNVIPAVARARLNIRFNDEHRGADLVELVRRTVAEHAPAATVRAVISGESFITPPGDFS
ALISAAIMKVTGLTPELSTTGGTSDARFLSKLCPVVEFGLCNATMHKLDEAVAIPDLHAL
ADIYEDIVRTVLAHPGA
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaccccctcgacctgacccagcgcctgatcgcctgccccagcgtgaccccggcc
gacgccggggcgatggccgtgatcgcgacggcgctggagtcgatcggcttcaccgtccat
cgcttcgcggccggcgaggcgcccgacgggccggtcgagaatctgttcgcgatccggggg
cagggcgggccgcatttcgcctttgccgggcatagcgacgtagtgccgcccggcgacggc
tggaccagcgatcccttcgtgccggagatccgcggcgagctgctccatgggcgcggcgcc
gtcgacatgaagggagcgatcgccgccttcatcgccgccgccgcgcggctgggcgatcat
cccgggacgatcagcctgatcatcaccggcgacgaggagggacccgccaccttcggcacc
gtcgcgctgatcgactggatgaaggcgcggggcctgtgccccgacctctgcctggtcggc
gagccgacctcgacccaccggctcggcgacatggtgaagatcggccggcgcggatcggtc
aacatgtggatcgagaatgtcgggacgcagggccatgtcgcctatccgcacctcgccgcc
aacccgatccccgcgctggtcaaggcgcttgacgcgctcgcggcgctccatctcgacgac
ggcaacgcctggttccagccgtcgaacctcgagatcacgacggtcgacgtcggcaatgcc
gcgaccaacgtcatccccgccgtcgcgcgggcgcggctcaacatccgcttcaacgacgag
catcgcggcgccgacctggtcgagctggtccgccgcaccgtcgcggagcatgcgccggcg
gcgacggtgcgcgcggtgatctcgggcgagagcttcatcaccccgcccggcgacttctcg
gcgctgatctcggcggcgatcatgaaggtgaccgggctgacccccgagctgtcgaccacc
ggcggcacctccgacgcgcgcttcctgtcgaagctctgcccggtcgtcgagttcggcctg
tgcaacgcgacgatgcacaagctggacgaggcggtggcgatccccgatctccacgccctc
gccgacatctacgaggacatcgtccgcaccgtgctggcgcaccccggagcctaa
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