Rhizorhabdus wittichii RW1: Swit_3689
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Entry
Swit_3689 CDS
T00538
Name
(GenBank) TRAG family protein
Organism
swi
Rhizorhabdus wittichii RW1
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Ortholog
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GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ABQ70035
UniProt:
A0A9J9HE30
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Position
4052392..4054422
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AA seq
676 aa
AA seq
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MSATKILWGQVFAVFLIVLAALWTATQWTAAALAYQPELGAPWFMLGDWPIYPPPAFFWW
WFSFDAYAPEIFETGAFIAVSGGFAAIVVAIGMSVWRARELKNAETYGSARWATRGEIAA
AGLLGPNGLMLGRLGRDYLRHDGPEHVLCFAPTRSGKGVGLVVPTLLTWPGSAIVHDIKG
ENWQLTAGFRARHARVLLFDPTNGASAAYNPLLEIRKGAWEVRDVQNVADVLVDPEGSLE
KRNHWEKTSHALLVGTILHVLYAEADKTLAGVAAFLSDPRRPIESTLWAMMTTPHLGEAG
VHPVVASAARELLNKSANERSGVLSTAMSFLGLYRDPVVAQVTRTCEWRIKDLVEGELPV
TLYLVVPPSDISRTKPLIRLILNQIGRRLTEDLKARQSRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGIQSFLIAQSLNQIEKAYGPNNAILDNCHVRVSFATNDERTAKRISDALGTA
TEMRAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPDDEIVMVAGIPPIRAKK
VRYFKDRRFTQRVTSPPDSNVGGGPPRPDDWSGLAPIEAPPMPEPIEHESPKKPKKKKAA
RKADAEDDAANADLRREPALERHIDIAPTPRPAPANEFELDEPDPDSDAARQATVRRQMQ
RVARQASLDPDDGIEL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaccaaaatcctttggggtcaggtcttcgcggtcttcctgatcgtgctcgcc
gccctgtggaccgcgacgcaatggaccgccgcggcgctcgcctatcagcccgagcttggg
gcgccctggttcatgctcggcgactggccgatctatccgccgccggccttcttctggtgg
tggttctcgttcgacgcctacgcgccggagatattcgagacgggcgcgttcatcgccgtg
tcgggcgggttcgccgcgatcgtcgtcgccatcggcatgtcggtatggcgcgcgcgcgag
ctgaagaacgccgagacctacggctcggcgcgctgggcgacgcgcggggagatcgccgcc
gccgggctgctcgggccgaacggcctcatgctcggccggctcgggcgcgactacctgcgc
cacgacggccccgagcatgtgctgtgcttcgcgccgacccggagcggcaagggcgtcggc
ctcgttgtgccgacgctgctcacctggccgggctcggccatcgtgcatgacatcaaaggc
gagaactggcagctcaccgccggctttcgcgcccggcacgcgcgggtgctgctgttcgat
ccgaccaacggcgcgtcggccgcctacaaccctctgctcgaaatccgcaagggcgcctgg
gaagtgcgcgacgtgcagaacgtcgccgacgtgctggtggacccggaaggctcgctggag
aagcgaaaccactgggagaagacctcccacgccttgctggtcggcacgatcctccatgtc
ctctacgccgaggccgacaagacgctggcgggtgtcgccgccttcctgtccgatccccgc
cgcccgatcgaaagcaccctatgggcgatgatgacgacgccgcatttgggcgaggcgggc
gtccatcccgtcgtcgcttcggccgcgcgcgagctgctcaacaaatcggccaacgaacga
tcgggcgtgctctcgaccgccatgtcgttcctcggcctctatcgcgatcccgtcgtcgcg
caggtcacgcgcacctgcgagtggcggatcaaggatctggtcgagggcgagctgccggtg
acgctctacctcgtcgtgccgccgtccgacatctcgcgcaccaagccgctcatccgcctc
atcctcaaccagatcggccgccgtctcaccgaagacctgaaggcgcggcagtcgcgccac
cggctgctcttgatgctcgacgagtttcccgcgctggggcggctcgacttcttcgagagc
gcgctggccttcatggccggctacggcatccagagcttcctcatcgcccagagcctcaat
cagatcgagaaggcttacgggccgaacaacgcgatcctcgacaactgccatgtgcgcgtg
tcgttcgccaccaacgacgaacgcaccgccaaacgcatctcggacgcgctcgggaccgcc
accgaaatgcgcgcgatgaagaactacgccggccaccggctctcgccctggctcgggcat
ctgatggtctcgcgctccgagacggcgcggcagctcctcacgcccggcgaaatcatgcag
ctcccgcccgacgacgagatcgtcatggtcgcgggcatcccaccgatccgggcgaagaag
gtccgctacttcaaggaccggcggttcacgcagcgggtgacgtcgccgcccgacagcaat
gtcggcggcggcccgccgcgtcccgacgactggagcggactggcgccgatcgaggcgccg
ccgatgcccgagccgatcgagcatgaatctcccaagaagccgaagaagaaaaaggccgcc
aggaaggcggatgccgaggacgatgccgccaacgcggacctgcgccgcgagccggcgctg
gagcgccatatcgacatcgcgccgacgccccggccggcgcccgccaacgagttcgagctg
gacgagccggaccccgatagcgacgcggcgcggcaggcgacggtgcgccgccagatgcag
cgcgtggcccggcaggcgtcgctcgatcccgacgacggcatcgagctatga
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