KEGG   Rhizorhabdus wittichii RW1: Swit_3779
Entry
Swit_3779         CDS       T00538                                 
Name
(GenBank) ABC transporter related
  KO
K10823  oligopeptide transport system ATP-binding protein
K15583  oligopeptide transport system ATP-binding protein
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi01501  beta-Lactam resistance
swi02010  ABC transporters
swi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:swi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Swit_3779
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Swit_3779
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    Swit_3779
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:swi02000]
    Swit_3779
Transporters [BR:swi02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Oligopeptide transporter
    Swit_3779
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 oligo_HPY nSTAND1 AAA_22 DUF87 Mg_chelatase AAA_33 AAA_28 RsgA_GTPase FtsK_SpoIIIE SbcC_Walker_B AAA_18 ATP-synt_ab nSTAND3 AAA_16 NACHT AAA_23 NB-ARC
Other DBs
NCBI-ProteinID: ABQ70124
UniProt: A0A9J9HEF1
LinkDB
Position
complement(4147384..4148934)
AA seq 516 aa
MTLLAADNLDIRIGGRRIVEGASFAIAAGRSLALVGASGSGKSQTCLAPFGLSPATVQGS
FRLDGEELVGAREARLRHVRGGDVGFVFQQPLTALTPHLTIGAQLREAWTQAGAPRPSRA
EMAAALERVGLNDPRERLDQYPHRLSGGQRQRALIAMAIAHRPKLLVADEPTTALDAMLR
AEIMVLLGRLCDEEGMALLLVSHDLAAVADHADAVAVMHAGRIVETGPTRAVLGDPKSDY
ARALIAASPRLDGPPPALGPVGTPLVEARQVSVSFARPGWRRGRLQAVDAVDIDVAEGEA
VAIVGGSGSGKSTLARAIARLGPIDAGEVRWRGAPLPPRKAMRPRDRAGLQPVFQDPVAS
LDPLWKVRDIVAEPLRRLRPDLDDAAVAARVEAVLAEVGLDPALAGRRPAALSGGQAQRV
AIARALGPDPAMLLLDEATSALDVLVAGTILDLLAELQKQRGLAILMITHDLAVARRLCH
RIVVMDAGRIVEEGPAERLIAAPAHPITAKLVAASR
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaccctgctcgccgccgacaatctcgacatccggatcggcggccggcggatcgtcgag
ggcgcgagcttcgcgatcgcggcgggccgctcgctggcgctggtcggcgcatcgggatcg
ggcaagagccagacctgcctcgcccccttcggcctgtcgcccgcgaccgtccagggctcc
ttccggctcgacggcgaggaactggtcggcgcacgcgaggcacggctgcgccatgtccgc
ggcggcgacgtcggcttcgtcttccagcagcctctgaccgcgctgaccccgcacctgacg
atcggcgcccagctccgcgaggcctggacccaggccggggcgccacgcccgagccgggcg
gagatggccgccgcgctcgaacgggtcgggctcaacgacccgcgcgagcggctcgaccaa
tatccgcaccgcctgtcgggcgggcagcggcagcgtgcgctgatcgccatggcgatcgcc
catcgcccgaagctgctcgtcgccgacgagccgaccaccgcgctcgacgcgatgctgcgc
gccgagatcatggtgctgctcggccggctgtgcgacgaggaggggatggcgctgctgctc
gtcagccacgacctcgccgccgtcgccgaccatgccgacgccgtcgcggtgatgcacgcc
ggccggatcgtcgagaccggcccgacccgcgcggtgctgggcgatccgaagagcgactat
gcccgcgcgctgatcgccgccagcccccgcctcgacggccccccacccgcgctcggcccg
gtcggcacaccgctggtcgaggcgcggcaagtgtcggtctccttcgcgcgaccgggctgg
cggcgcggccgtctccaggcggtcgacgccgtcgacatcgacgtggccgagggggaggcc
gtggcgatcgtcggcggatcgggatcgggcaagtcgacgctggcgcgcgcgatcgcccgg
ctcggcccgatcgacgcgggcgaggtccgctggcgcggcgccccgctgccgccgcgcaag
gcgatgcgcccgcgcgaccgcgccgggctccagccggtgttccaggacccggtcgccagc
ctcgatccgctgtggaaggtccgcgacatcgtcgccgagccgctgcgccggctgcgcccc
gacctcgacgatgcggcggtcgccgcgcgggtcgaggcggtgctggccgaggtcgggctc
gaccccgcgctcgccggccggcggcccgccgcgctgtcgggcggccaggcgcagcgcgtc
gcgatcgcccgcgcgctcggccccgatccggcgatgctgctgctcgacgaggcaacctcg
gcgctggacgtgctcgtcgcgggcacgatcctcgacctgctcgccgagctccagaagcag
cgcggcctcgccatattgatgatcacccacgacctcgccgtcgcccggcggctctgccac
cgcatcgtcgtgatggatgcgggccggatcgtcgaggagggaccggccgagcgcctgatc
gcggcgccggcccatcccatcacggcgaaactggtggcggcgagccgctga

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