Rhizorhabdus wittichii RW1: Swit_3779
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Entry
Swit_3779 CDS
T00538
Name
(GenBank) ABC transporter related
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi01501
beta-Lactam resistance
swi02010
ABC transporters
swi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Swit_3779
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Swit_3779
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Swit_3779
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3779
Transporters [BR:
swi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Swit_3779
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
oligo_HPY
nSTAND1
AAA_22
DUF87
Mg_chelatase
AAA_33
AAA_28
RsgA_GTPase
FtsK_SpoIIIE
SbcC_Walker_B
AAA_18
ATP-synt_ab
nSTAND3
AAA_16
NACHT
AAA_23
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ABQ70124
UniProt:
A0A9J9HEF1
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Position
complement(4147384..4148934)
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AA seq
516 aa
AA seq
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MTLLAADNLDIRIGGRRIVEGASFAIAAGRSLALVGASGSGKSQTCLAPFGLSPATVQGS
FRLDGEELVGAREARLRHVRGGDVGFVFQQPLTALTPHLTIGAQLREAWTQAGAPRPSRA
EMAAALERVGLNDPRERLDQYPHRLSGGQRQRALIAMAIAHRPKLLVADEPTTALDAMLR
AEIMVLLGRLCDEEGMALLLVSHDLAAVADHADAVAVMHAGRIVETGPTRAVLGDPKSDY
ARALIAASPRLDGPPPALGPVGTPLVEARQVSVSFARPGWRRGRLQAVDAVDIDVAEGEA
VAIVGGSGSGKSTLARAIARLGPIDAGEVRWRGAPLPPRKAMRPRDRAGLQPVFQDPVAS
LDPLWKVRDIVAEPLRRLRPDLDDAAVAARVEAVLAEVGLDPALAGRRPAALSGGQAQRV
AIARALGPDPAMLLLDEATSALDVLVAGTILDLLAELQKQRGLAILMITHDLAVARRLCH
RIVVMDAGRIVEEGPAERLIAAPAHPITAKLVAASR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgctcgccgccgacaatctcgacatccggatcggcggccggcggatcgtcgag
ggcgcgagcttcgcgatcgcggcgggccgctcgctggcgctggtcggcgcatcgggatcg
ggcaagagccagacctgcctcgcccccttcggcctgtcgcccgcgaccgtccagggctcc
ttccggctcgacggcgaggaactggtcggcgcacgcgaggcacggctgcgccatgtccgc
ggcggcgacgtcggcttcgtcttccagcagcctctgaccgcgctgaccccgcacctgacg
atcggcgcccagctccgcgaggcctggacccaggccggggcgccacgcccgagccgggcg
gagatggccgccgcgctcgaacgggtcgggctcaacgacccgcgcgagcggctcgaccaa
tatccgcaccgcctgtcgggcgggcagcggcagcgtgcgctgatcgccatggcgatcgcc
catcgcccgaagctgctcgtcgccgacgagccgaccaccgcgctcgacgcgatgctgcgc
gccgagatcatggtgctgctcggccggctgtgcgacgaggaggggatggcgctgctgctc
gtcagccacgacctcgccgccgtcgccgaccatgccgacgccgtcgcggtgatgcacgcc
ggccggatcgtcgagaccggcccgacccgcgcggtgctgggcgatccgaagagcgactat
gcccgcgcgctgatcgccgccagcccccgcctcgacggccccccacccgcgctcggcccg
gtcggcacaccgctggtcgaggcgcggcaagtgtcggtctccttcgcgcgaccgggctgg
cggcgcggccgtctccaggcggtcgacgccgtcgacatcgacgtggccgagggggaggcc
gtggcgatcgtcggcggatcgggatcgggcaagtcgacgctggcgcgcgcgatcgcccgg
ctcggcccgatcgacgcgggcgaggtccgctggcgcggcgccccgctgccgccgcgcaag
gcgatgcgcccgcgcgaccgcgccgggctccagccggtgttccaggacccggtcgccagc
ctcgatccgctgtggaaggtccgcgacatcgtcgccgagccgctgcgccggctgcgcccc
gacctcgacgatgcggcggtcgccgcgcgggtcgaggcggtgctggccgaggtcgggctc
gaccccgcgctcgccggccggcggcccgccgcgctgtcgggcggccaggcgcagcgcgtc
gcgatcgcccgcgcgctcggccccgatccggcgatgctgctgctcgacgaggcaacctcg
gcgctggacgtgctcgtcgcgggcacgatcctcgacctgctcgccgagctccagaagcag
cgcggcctcgccatattgatgatcacccacgacctcgccgtcgcccggcggctctgccac
cgcatcgtcgtgatggatgcgggccggatcgtcgaggagggaccggccgagcgcctgatc
gcggcgccggcccatcccatcacggcgaaactggtggcggcgagccgctga
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