Rhizorhabdus wittichii RW1: Swit_3857
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Entry
Swit_3857 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3857
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABQ70202
UniProt:
A0A9J9LDY7
LinkDB
All DBs
Position
complement(4241980..4244211)
Genome browser
AA seq
743 aa
AA seq
DB search
MIQRTKALRLLAAATALTTVALPQAGFAQATETAAAEAADAGDMGEIVVTARRREESLID
VPISVSAISGEALSRTGAIDITTLQDKTPNMTLQVARGSNSTLIAFIRGIGQQDPVWGFE
PGVGLYVDDVYIARPQGAVLDIFDIDRVEVLRGPQGTLYGRNTIGGAIKYVTRRLGHDFE
AKVRASYGSYNQREIVASVTVPLTDTFSIGGAVAYYKRDGFGKNLFTGAEHYNKDVLAGR
VSAEWTPTDQLSVRLAADETRDNSNPRHGYRLLPNGGLPDFNPIGDVYDTRAGVGDDNKV
VTKGVSGTIEYEASDLLTLKSITAYRKGHTDTVIDFDGTPGPVLDIPSFYKDHQFTQEFQ
ALLQSDRVQGVFGLYYLNGSASGAFDTVIGNANLTTLTSGDVDTKSYAAFADVSVKLSDQ
FSVSVGGRYTSDKREGTVFRADYLGLRSPLFGRPTAVPFRIRTDYTNSRTDKKFTPRLSL
SYKPVEDVNLYASWSRGYKSGGFDPRGDAIFTPGTVDGYKPETVTAYEAGMKGAFLNRTL
FVNVAGFYSDYKDQQVTTQFLSGTTVVSSVDNVGKSRIYGWELELRAVPDRDFQVQASVG
YTNAKFKEFLTLDPLTLKVRDFADERVFQNTPKYTANVSATLGHDFDGLGRVTITPALSF
RSGYSLFEVPNPVLDQKAYELVDLSIVWTSPDKRFSLSGHGRNLFDRKYRVGGYNFPGAL
TGNSVIGFYGPPRTFTVTGEVRF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaggaccaaggccctgcggctcctcgccgccgcaaccgccctcaccaccgtc
gcgctgccgcaggccggcttcgcccaggccacggagaccgccgccgccgaggcggccgac
gccggcgacatgggcgagatcgtcgtcaccgcccggcgccgcgaggaaagcctgatcgac
gtgccgatctcggtgtcggcgatcagcggcgaggcgctgtcgcgcaccggcgcgatcgac
atcaccacgctgcaggacaagaccccgaacatgaccctgcaggtcgcgcgcggatcgaac
agcacgctgatcgccttcatccgcggcatcggccagcaggacccggtgtggggcttcgag
cccggcgtcggcctctatgtcgacgacgtctacatcgcccgcccgcagggcgcggtgctc
gacatcttcgacatcgaccgggtcgaggtgctgcgcgggccgcagggcacgctctacggc
cgcaacacgatcggcggcgcgatcaagtatgtcacccgccgcctcggccatgatttcgag
gcgaaggtccgcgcctcctatggcagctacaaccagcgcgagatcgtcgcgtcggtgacg
gtgccgctcaccgacaccttctcgatcggcggcgcggtcgcctattacaagcgcgacggc
ttcggcaagaacctgttcaccggcgccgagcattacaacaaggacgtgctcgccggccgc
gtctcggccgaatggacgccgaccgaccagctctcggtccgcctcgccgccgacgagacc
cgcgacaattcgaacccgcgccacggctatcgcctgctgcccaatggcgggctgcccgat
ttcaacccgatcggcgacgtctacgacacccgcgcgggcgtcggcgacgacaacaaggtc
gtgaccaagggcgtctcgggcacgatcgaatatgaggcgtcggacctgctgaccctcaag
tcgatcaccgcctatcgcaagggccataccgacacggtgatcgatttcgacggcacgccg
ggcccggtgctcgacatcccgtccttctacaaggaccaccagttcacccaggaattccag
gcgctgctgcaaagcgaccgggtgcagggcgtgttcggcctctattatctcaacggctcg
gcctcgggcgcgttcgacacggtgatcggcaacgccaacctgacgacgctgacctcgggc
gacgtcgacaccaagtcctatgccgccttcgccgacgtctcggtcaagctcagcgaccag
ttctcggtctcggtcggcggccgctacaccagcgacaagcgcgagggcaccgtgttccgc
gccgactatctcggcctgcgctcgccgctgttcggccggccgacggcggtgccgttccgc
atccgcaccgactacaccaacagccgcaccgacaagaagttcacgccgcgcctgtcgctc
agctacaagccggtcgaggacgtcaacctctatgcgtcctggtcgcgcggctacaagtcg
ggcggcttcgatccgcgcggcgacgccatcttcacgccgggcaccgtcgacggctacaag
cccgagaccgtcaccgcctatgaggccggcatgaagggcgccttcctgaaccgcaccctg
ttcgtcaacgtcgcgggcttctattccgactataaggaccagcaggtcacgacccagttc
ctgtcgggcaccacggtcgtctcgtcggtcgacaatgtcggcaagtcgcgcatctacggc
tgggagctcgagctgcgcgccgtgcccgaccgcgatttccaggtgcaggcgtcggtcggc
tacaccaacgccaagttcaaggagttcctgaccctcgatccgctgaccctcaaggtccgc
gacttcgccgacgagcgggtgttccagaacacgccgaaatacaccgccaacgtctcggcg
acgctgggccatgatttcgacgggctcggccgcgtcacgatcaccccggcgctctccttc
cgcagcggctattcgctgttcgaggtgccgaacccggtgctcgaccagaaggcctatgag
ctggtcgacctgtcgatcgtctggacctcgcccgacaagcgcttctcgctctccggccat
ggccgcaacctgttcgaccgcaagtatcgcgtcggcggctataatttcccgggcgcgctg
accggcaattcggtgatcggcttctacggcccgccgcgcaccttcaccgtcaccggcgag
gtgcgtttctga
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