Rhizorhabdus wittichii RW1: Swit_3918
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Entry
Swit_3918 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_3918
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_3918
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ70263
UniProt:
A0A9J9LFP2
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Position
4300698..4302884
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AA seq
728 aa
AA seq
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MIRPFRIAASVSALAIAMPALAQVSPDAATETAKDDIVVTAARSILPANALPLTIDIVGK
SELDQQMSISGSVIDSIATLTPSFSPTRQKMSGAGETLRGRSPLYAINGIPQTTPLRDGS
RDGFTIDGFFIDRVEVIYGSNALQGVGGTGGIVNQVTVAPPTAEGFGGRVLLQGNADNDF
RKDGLGGKAAGLVQYRKDCFDATVGAAYEKRAVFYDGDGRRVGVNLTQGETQDSKTLSLF
GRFGYQLGDTGRIDLIASRYEMKVDGDYIAVAGDKTAGLPTSATRGNPPLKPAESRTESV
ALSVTDTDLGGGNFVSQLFFNRTRDTFGGEPVTQATFQDPTIAPVGTLFDQSQNRSRKLG
FKISYERAVPGFEALTGTLGFDALFDKTEQRLIATNRVWVPPSDFRSLAPFAQLNLALFD
EKLRLAGGARWENVQIRIDDFQTLASTTVTTANPNAYGGVMVGGGKPKFDDVLLNGGIIF
EPWKGIRAYASYAEGFTVADIGRITRAIGKPGIDLDNYLDISPVISNNREIGVEVKRGPL
DTSVTYFWSSSNKGQVLVNGGAGIFNVIRQRVEIEGLEVNAGVRMPIDGLRLSVGYAHIK
GRYDASATPDGTAGTDLDGANISPDRLNLAASFNRGAVSARVQTNFYLSRTFRSSEIVLD
PRNRFGGYDLTDASIRYQTGLGGFTFSVQNLFDKQYIDYASATQRPTDNFFNFAGRGRNF
TLSWDYRF
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtccgttccgtatcgccgcatctgtctcggcactcgccatcgccatgcccgcc
ctggcccaggtctcgcctgacgccgctaccgaaacggcgaaggacgacatcgtcgtcacc
gccgcgcgcagcatcctgccggccaatgccctgccgctgaccatcgacatcgtcggcaag
tccgagctcgaccagcagatgtcgatctccggatcggtgatcgattcgatcgcgacgctg
accccgtccttctcgccgacccggcagaagatgtcgggcgcgggcgagacgctgcgcggc
cgctcgccgctctatgcgatcaacggcatcccgcagaccaccccgctgcgcgacggcagc
cgcgacggcttcacgatcgacggtttcttcatcgaccgggtcgaggtgatctacggctcg
aacgcgctgcagggtgtcggcggcaccggcggtatcgtcaaccaggtcacggtcgcgccg
ccgaccgccgaggggttcggcggccgggtgctgctgcagggcaatgccgacaatgatttc
cgcaaggacggcctgggcgggaaggccgccggcctggtccagtatcgcaaggactgcttc
gacgcgacggtcggcgcggcctatgagaagcgggcggtcttctacgacggcgacggccgc
cgggtcggcgtcaacctgacccagggcgagacgcaggattcgaagaccctctcgctgttc
ggccggttcggctaccagctcggcgataccggccggatcgacctgatcgccagccgctac
gagatgaaggtcgacggcgactatatcgccgtggcgggcgacaagacggccggcctgccg
accagcgccacgcgcggcaacccgccgctcaagcccgccgagagccgcaccgaaagcgtc
gcgctttcggtcaccgacaccgatctcggcggcggcaacttcgtcagccagctgttcttc
aaccggacccgcgacaccttcggcggcgagccggtcacgcaggcgaccttccaggacccg
acgatcgcgccggtcggcacgctgttcgaccagtcgcagaaccggtcgcgcaagctcggc
ttcaagatcagctatgagcgcgcggttcccggtttcgaggcgttgaccggcacgctcggc
ttcgatgcgctgttcgacaagaccgagcagcggctgatcgccaccaaccgcgtctgggtg
ccgccgagcgatttccgcagcctcgcgcccttcgcccagctcaacctggcgctgttcgac
gagaagctccgcctggcgggcggcgcgcgctgggagaatgtccagatcaggatcgacgac
ttccagacgctcgcctcgaccacggtgacgacggccaatccgaacgcttatggcggcgtc
atggtcggcggcggcaagccgaagttcgacgacgtgctgctcaacggcggcatcatcttc
gagccgtggaagggcatccgcgcctatgccagctatgccgagggcttcaccgtcgccgac
atcgggcgcatcacccgggcgatcggcaagcccggcatcgacctcgacaattatctcgac
atcagcccggtcatctcgaacaaccgcgagatcggcgtcgaggtgaagcgcgggccgctc
gataccagcgtcacctatttctggtcgtcgagcaacaagggccaggtgctggtcaacggc
ggcgccggcatcttcaacgtgatccgccagcgggtcgagatcgaggggctggaggtcaac
gccggggtccgcatgccgatcgacgggctcaggctgtcggtgggctatgcccatatcaag
ggccgctacgatgccagcgcgacgcccgacggcacggcggggaccgacctcgacggcgcc
aacatctcgcccgatcgcctgaacctggcggccagcttcaaccggggcgcggtctcggcg
cgggtgcagaccaacttctatctgagccggaccttccggagcagcgagatcgtgctcgat
ccacgcaacaggttcggcggttatgacctgaccgatgcgagcatccgctaccagaccggc
ctgggcgggttcaccttctcggtccagaatcttttcgacaagcaatatatcgactacgcg
tccgccacgcagcgcccgaccgacaatttcttcaacttcgccgggcgcggccgcaacttc
acgcttagctgggactatcgcttctga
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