Rhizorhabdus wittichii RW1: Swit_3949
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Entry
Swit_3949 CDS
T00538
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00470
D-Amino acid metabolism
swi00550
Peptidoglycan biosynthesis
swi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Swit_3949
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Swit_3949
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Swit_3949
Enzymes [BR:
swi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Swit_3949
Peptidoglycan biosynthesis and degradation proteins [BR:
swi01011
]
Precursor biosynthesis
Amino acid ligase
Swit_3949
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
ABQ70294
UniProt:
A0A9J9LFD6
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Position
complement(4335218..4336705)
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AA seq
495 aa
AA seq
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MITSPAFAGKHYAVLGLARSGLATVEALLASGAKVTAWDSNEAARQKILPMRSMGRGTGE
AGGGGDSEAGAARHPLHHPADGPPPPAARGEDLVLADPIEIDLTGYAGVVVSPGVPLNRH
PIAGHAASFGVPVISDIELFAQARASLPAHKVVGITGTNGKSTTTALIAHILETAGVPTL
MGGNIGLPILGRDPLPAGGVYVLELSSYQIDITQSLDCDVAVLTNITPDHLDRYDGFAGY
AASKLRLFTMQGKGISVIAGDDEPSVEIINALRNRPIHPASLSWATTEQGEQRPVISRVE
MGRVMRVMSSSLQGQENWPALQGPHNAQNAALAIETCRLLGLSYSQIDQGLRSYPGLPHR
MQRVAEKRGVLFVNDSKATNATATAPALGAYPKIHWILGGLPKTDDLDDCAPWFGHVVAG
YTIGQAGPMFARILREAGKPVTESGTLDQAVADAAAAARPGEVVMLSPACASFDQFSDYE
ARGDAFRRAVEGLPL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgatcacgagccccgccttcgccggaaagcactatgccgtcctcggcctcgcccggtcg
gggctggcgacggtcgaggcgctgctcgccagcggcgccaaggtgacggcgtgggactcg
aacgaggcggcgcgccaaaaaatcctccctatgcgcagcatggggagggggaccggcgaa
gccggtggagggggcgacagcgaagctggcgctgcgcgccaccccctccaccatcctgcg
gatggtccccctccccccgctgcgcgcggggaggatttggtattggccgacccgatcgag
atcgacctgaccggctatgccggggtcgtcgtgtcgccgggcgtgccgctcaaccggcat
ccgatcgccggccatgccgccagcttcggcgtaccggtgatcagcgacatcgagctgttc
gcccaggcgcgcgcttcgctgcccgcgcacaaggtcgtcggcatcaccggcaccaacggc
aagtcgaccaccaccgcgctgatcgcccatatcctggagacggcgggcgttcccacgctg
atgggcggcaatatcggcctgccgatcctcggccgcgatccgctgccggcgggcggggtc
tatgtgctcgagctgtcgagctaccagatcgacatcacccagagcctcgactgcgacgtc
gcggtgctgaccaacatcacccccgaccatctcgaccgctatgacggcttcgccggctat
gccgcttcaaaactccgcctcttcacgatgcaggggaagggtatctcggtcattgccggt
gacgacgaacccagcgtcgagataatcaacgcgcttcgaaatcgaccgatacatccagcc
tctttatcttgggcgactacggaacaaggcgaacagcggcccgtcatcagccgcgtcgaa
atgggccgtgtgatgcgcgtgatgtccagttcgttgcaaggtcaagagaactggccagcc
ctgcaaggtccgcacaatgcgcagaatgcagcgctggcgatcgagacctgtcggctgctg
ggtttgtcatatagtcaaatagaccaaggtctgcgcagctatcccggcctgccgcaccgc
atgcagcgcgtcgccgagaagcgaggcgtgctgttcgtcaacgacagcaaggcgaccaac
gcgaccgcgaccgcgccggcgctcggcgcctatccgaagatccactggatcctcggcggg
ctgcccaagaccgacgatctcgacgattgcgcgccctggttcggccatgtcgtcgccggc
tacacgatcggccaggcgggcccgatgttcgcccgcatcctgcgcgaggcgggcaagccg
gtgaccgagagcggcacgctcgaccaggcggtggccgatgccgccgcggcggcgcggccg
ggcgaggtggtgatgctgtcgccggcctgcgcctcgttcgaccagttcagcgactatgag
gcacgtggcgacgctttccgtcgcgcggtggaggggcttccgctatga
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