Rhizorhabdus wittichii RW1: Swit_3959
Help
Entry
Swit_3959 CDS
T00538
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Swit_3959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_3959
Enzymes [BR:
swi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
Swit_3959
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Swit_3959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABQ70304
UniProt:
A0A9J9HET8
LinkDB
All DBs
Position
4346422..4346994
Genome browser
AA seq
190 aa
AA seq
DB search
MLLGSVGKSHHLRAMTDLPPRKASFPPVVSADTRLLLLGSLPGEASLRAARYYAHPQNQF
WRLTGAVIGDEGLALLDYPARLDRLRAAGVGLWDVVADALRDGSLDGAIRDHRPNDLAAL
VATLPALRAIGFNGGTAARLGRRMIGAPAGLALVDLPSSSPAFTRPIAEKREKWLHLREF
LDPIAGFRRD
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcttggcagcgtcggcaaatcccaccatctccgggccatgaccgatcttcccccg
cgcaaggccagcttccccccggtggtctccgccgacacccgcctgctgctgctcggcagc
ctgccgggcgaggcgtcgctgcgcgccgcgcgctattatgcccatccgcagaaccagttc
tggcgactgaccggcgcggtgatcggcgacgaggggctggcgctgctcgactatccggcg
cggctcgaccggctgcgcgcggccggggtcggcctgtgggacgtcgtcgccgacgcgctg
cgcgacggcagcctcgacggggcgatccgcgatcatcggccgaacgatcttgcggcgctc
gtcgcgacgctgccggcgctccgcgcgatcggcttcaacggcggcacggcggcgcgactc
gggcggcggatgatcggggcgccggcgggactcgcgctggtcgacctgccgtcgagcagc
cccgccttcacccggccgatcgccgagaagcgggaaaaatggctccatttgcgcgaattc
ctcgatccgatagccggattccgccgcgattga
DBGET
integrated database retrieval system
