Rhizorhabdus wittichii RW1: Swit_3981
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Entry
Swit_3981 CDS
T00538
Name
(GenBank) Ku family containing protein
KO
K10979
DNA end-binding protein Ku
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Swit_3981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_3981
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Swit_3981
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF7189
Motif
Other DBs
NCBI-ProteinID:
ABQ70326
UniProt:
A0A9J9LGD6
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All DBs
Position
4370839..4371696
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AA seq
285 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYPATGSGAQVAFHQIHEPSGKRIKYEKVVPGIGPVDTD
DIVKGYEVSKGNYVLLEQDEIDAVKLESKRTLELVQFVDSHEIDVLYFDKPYYVVPADEL
AEEAFIVLREALRRTRKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVRKAQGYFR
DIPDSKPDADLLDLAETLIDKKSARFDANEFHDRYVDALKALIEKKRKGKGRKVIEEAEE
APARKGNVIDLMAALKRSVEGGSAAKATPARKAAPPRKAPARKRA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgcctattggcagggacagatccgcctcgcgctcgtctcgatcccggtc
gagatctatcccgcgaccggcagcggggcgcaggtcgccttccaccagatccacgaaccg
tcgggcaagcggatcaaatatgagaaggtggtgcccggtatcgggccggtcgataccgac
gacatcgtcaagggctatgaggtgtcgaagggcaattacgtcctgctcgaacaggacgag
atcgacgcggtcaagctggagagcaagcgtacactggaactggtccagttcgtcgattcg
cacgagatcgacgtgctctacttcgacaagccctattatgtcgtccccgccgacgagctg
gccgaggaggcgttcatcgtgctgcgcgaggcgctgcgccgcacccgcaaggtcgggctg
gggcagctcgcgatgcgcgggcgcgaatatgtcgtcagcctgaagccctgcgggcgcggc
atggttctggagacgctccgctacgccgacgaggtgcgcaaggcgcagggctatttccgc
gacatccccgacagcaagcccgatgccgacctgctcgacctggccgaaacgctgatcgac
aagaagagcgccaggttcgacgccaacgagttccacgaccgctatgtcgatgccctcaag
gcgctgatcgagaagaagcgcaaggggaagggcaggaaggtcatcgaggaggccgaggag
gctccggcgcgcaagggcaacgtcatcgacctgatggccgcgctcaagaggtcggtcgag
ggcgggagcgccgcgaaggcgacgcccgcgcggaaggcggccccgccgcgcaaggcgccc
gcccgcaagcgggcctga
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