Rhizorhabdus wittichii RW1: Swit_4147
Help
Entry
Swit_4147 CDS
T00538
Name
(GenBank) transcriptional regulator, AraC family
Organism
swi
Rhizorhabdus wittichii RW1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Sigma70_r4
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_20
Arabinose_bd
HTH_5
MerR
HTH_30
HTH_8
Motif
Other DBs
NCBI-ProteinID:
ABQ70487
UniProt:
A0A9J9LE93
LinkDB
All DBs
Position
complement(4560187..4561182)
Genome browser
AA seq
331 aa
AA seq
DB search
MTAWAQQMQLTAGDAVFTGPDVALMRTLIADETTDAHGCPGLSLMDQARIAADAAGPALI
DRVSQPLGRYGQAGSAILTSSTLRVALASMNTIAPLLNLRHELVLASCSGDGVVLFRPFS
GIDAAARDALLPLDAAKVALFLVQLLDGTDRTVRLVAPPRWIASFARSLILADRVELIEG
DMFEIRVPGPSATMPLPGRCVAGHARWMRACIRTIRAMVEDRLLESVRRLVNTATDDAPS
LSDVAARLHLSARTLRRRLADRGVSFMRIVDEERRSLALQYVMGGEMTVESIAERLGYSE
SANFRHAFRRWTGSSPRNYLASSQMLEAVRA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttgggctcagcagatgcaactcaccgccggcgatgcggtcttcaccggcccg
gatgtcgctctgatgcgcaccctgatcgcagacgagacgacggacgcgcacggctgcccc
ggcctgtcgctgatggaccaggcgcgaatcgccgccgacgcggccggccccgcgctgatc
gaccgcgtgtcgcagccgctcggccgctacggccaggccggatcggcgatcctcacctcc
tcgacgctgcgggtcgcgctcgcctcgatgaacacgatcgccccgctgctgaacctgcga
cacgagctggtgctcgcctcctgctcgggcgacggcgtggtgctgttccggccgttctcc
gggatcgacgcggcggctcgggacgcgctgctgccgcttgacgcggccaaggtcgcgctg
tttctcgtccagcttctcgacggcaccgacaggaccgtccgcctcgtcgccccaccccgc
tggatcgccagcttcgcacgatcgctgatattggccgatcgggtcgaactgatcgagggc
gacatgttcgaaatccgcgtacccggcccgtccgcaaccatgccgttgcccggccgctgc
gtcgccggccatgcccgttggatgcgcgcctgcatccgcaccatccgcgccatggtcgag
gatcggctgctggaaagcgtgcggcggctggtcaacacggcgaccgacgacgccccgtcg
ttgagcgacgtcgccgcgcgcctgcatctctcggcacgcacgctgcgccggcggctggcc
gatcgcggggtcagcttcatgcggatcgtcgacgaggagcggcgcagcctggccctacaa
tatgtgatgggcggcgagatgacggtggaatcgatcgccgagcggctgggttacagtgag
agcgccaatttccgccacgccttccgccgctggaccggctcctcgccacgcaactatctg
gcaagcagccagatgctcgaggccgtccgagcctga
DBGET
integrated database retrieval system
