Rhizorhabdus wittichii RW1: Swit_4179
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Entry
Swit_4179 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4179
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_4179
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ70519
UniProt:
A0A9J9LFJ1
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Position
4598163..4600511
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AA seq
782 aa
AA seq
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MVFGCFVSRAFSGVRSIGLTAGCSLLPLMAPGALAQVAAPQAGDQNDDIVVTAQKRSQNL
QDVGITMAAISGDKLRDNAITTSTEIAKIIPGISVSGVAGGQFTTFVIRGVTQSDFGDHT
EAPTAVYLDEGYIASGQGQSFALFDLERVEALKGPQGTLFGRNATGGLVHFISRKPTQEL
DGFVQGTYGSYNQTRLEAAIGGGLGDKVSVRAAGLFNSHKPVLKNLYLRADGRRADGEWT
DHTVAGRFHLEFQPTETLKILFTAHAGESRKSTSPYDQRASVPVLDGSGRVIDSIFAAPT
ETRFAIIPPGAINVDPSLIGIRPVPGGDWGGYRGGDPEALTVTKNFSDRDGNRFRMWGGS
AKVSYELGDLNLVSITDYKKVTKRVYMDIDASPRNDLVFPALAETANFSEELRLSRDSGR
FRWIVGAYYLNIDTNAETGFLINAPLDATIRELIPNSVYIRDLTSLRTKSYSLFAQAEYD
LSDVLTIIAGARGTQENKDFTYRTDQLVRATFASNLRNFADGDNRMLWSGKAQLNWKPVE
DVLIYGGINRGVKAGSWNAPLAGNPVITDAQLAYKPEVLTSYEVGLKTTFWDGRGRFNAA
AFYYDYHDYQASLFLGLAQRILNADATIKGLEAEFAIKPVPGLDIQISGAFTDTNVEDVN
VNGIVRDRESAYAPRWTGNASARYRVPVGFGQVYAQVDASYSGRFYYSLTNFTSTRVNRY
VIPNAEIGFTSLDGRFSLAAFARNFTDKRYIAVGADLSGFGGYSEQSYGNPRWLGIRAGY
TF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggttttcggctgttttgtaagccgcgccttttcgggcgtccggtccatcggtctgacc
gccgggtgcagcctgctgccactcatggcgccgggggctctcgcacaggtcgcggctccg
caggcgggcgatcagaatgacgacatcgtcgtcaccgcccagaagcggagccagaacctc
caggatgtcggcatcaccatggccgccatttccggagacaagttgcgggacaacgccata
accaccagcaccgagatcgcgaagatcattccgggcatctcggtcagcggcgtcgcgggc
ggccagttcaccaccttcgtcattcgtggcgtcacgcagagcgatttcggggaccatacc
gaagcccccaccgcggtctatctcgacgagggctacatcgcctcgggacagggccagagc
ttcgcgctgttcgacctcgagcgggtcgaggcgctgaagggaccccaaggcacgctcttc
gggcgcaatgcgacgggcggcctcgtccacttcatctcgcgcaagccgacgcaggaactc
gacggtttcgtccagggtacctatggttcctataaccagacgcgtctcgaagcggccatc
ggcggcgggctgggcgacaaggtgtcggtccgggccgcgggtcttttcaacagccataaa
cccgtcctcaagaatctgtatctccgagctgatggccggcgggccgatggggagtggacc
gaccatacggtggccggccgcttccatctggagttccaaccgaccgagacgctcaagatc
ctgttcacggcccatgccggtgaatcccgcaaatcgacctctccctacgaccagcgcgca
tcggttccggtgttggacggcagcggcagggtgatcgattcgatcttcgcggcgccgacg
gagacgcgcttcgcgatcattccgccgggagcgatcaacgtcgatccgtcgctgatcggc
atccggcccgttcccggtggtgattggggcggctatcgcggcggcgatcccgaggcgcta
acggtcaccaagaatttcagcgaccgcgatggcaaccggttcaggatgtggggtggcagc
gccaaggtcagctatgagctgggtgacctgaacctcgtgtcgatcaccgactataagaag
gtgaccaagcgcgtctacatggacattgacgcctccccgcggaacgacctggtgtttccg
gcgcttgccgaaacggccaatttctccgaggaactgaggttgtccagagacagcggccgg
ttccgatggatcgtcggagcctattatctcaacatcgacaccaacgccgaaacgggtttc
ctcatcaatgctccgctggatgcgacgatcagggaactcataccgaactcggtctatatc
cgcgacctgacgtcgctcaggaccaagtcctattcgctgttcgcccaggcggaatatgac
ctgtccgatgtgctgacgattattgccggcgcgcgcggaacgcaggagaataaggatttc
acctatcgaaccgatcaactcgttcgcgccaccttcgccagcaacctgcgcaatttcgcg
gacggcgacaaccgcatgctctggtcgggaaaggcccagctgaactggaagccagttgag
gacgtcctcatctatggcggcatcaatcgcggtgtgaaggcgggaagctggaatgcgccg
cttgccggcaatccggtgatcaccgatgctcagcttgcctacaagccggaggtgctgacc
tcctatgaggtgggcctgaaaacgacattctgggacggcaggggacgtttcaacgcggcg
gccttctattatgactatcatgattaccaggcatcgcttttccttggtcttgcccaacgg
attctgaacgccgacgccaccatcaagggtcttgaggccgagttcgctatcaagccggta
ccagggctcgacatccagatctccggcgcgtttaccgacaccaatgtcgaagatgtcaat
gtcaacgggatcgtccgggatcgcgaaagcgcctatgcaccccgctggaccggcaatgcc
tcggcacggtacagggtgccggtcggcttcggtcaggtctatgcacaggtcgacgcttct
tattcgggccgcttctattattccctgaccaacttcacctcgaccagggtcaatcgctac
gtcatcccgaatgcggagatcggctttacgagcctggacgggcgcttctccctggcagcg
ttcgcccgcaatttcaccgacaagcgctatatcgccgtcggtgccgatctgagcggtttc
gggggctattcggagcagtcctacggcaatccgcgatggctgggcatccgtgccggttac
actttctga
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