Rhizorhabdus wittichii RW1: Swit_4318
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Entry
Swit_4318 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4318
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_4318
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABQ70658
UniProt:
A0A9J9HF94
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All DBs
Position
4759675..4762605
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AA seq
976 aa
AA seq
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MLTVRGTSSVRLRCWLLLGSAMLGSPALAQGVSPVPDAASAPAEDIVVTGSRIARKDLTS
SSPLVAIAPSALKTNASVTLDDTLTRLPQVTPSYGSGSNDTSTGGTTTVALRGLGAQRTL
VLLNGRRLTAGTYTGAVDLNMIPTALIESIEVITGGASAAYGSDAIAGVINFRLKKNFEG
VQLDGQTGITSRGDGFTSSLSLTAGGNFADDRGNAVLSVDYAKRRGVSNRSRAFSRISRP
SGALPFGVYVPSALNLPAAGAVDGVFAGYGVAPGSVGPNSNLSFNANGSLFAPTSGINYD
GSGQDIVRLGNGVFYNSTGVSGLTIPLERFGLFGRAEYEVADDINVYAEGGYQHFTSSLV
FGPGFNTLTVPTTNPFIPDDLRTVLASRPNPNASFSVLRRYADVGQRTADFTTNSYRLLA
GVTGRIEAIDGTFDVFASRGEQTVDRRDHNGVNLTTLNALINAADGGASQCAGGYDPFAL
NGGAACATLLRSTTIRNTKFKQNYVEANVQGRLFSWWAGDVRFALGADRRSDSYDFQPDT
GVRTGQILGIEGVGVPAVNGSVTVKEVFGELLVPILRDLPLVKAFDVTLGYRYSDYDLSG
GVDAYRIEGDWRVIDALRIRGGFSRAVRAPNVSELFTPQSPLTPIIGAPGAPGQGDPCDV
RSAYRTGANAAQVRALCLAQGVPGQIIDSYTFNNTQLVDGGITGGNPKLKPESANTYTIG
AVLTPRLPSSILSNLSLSVDYYSIDLKKAIGAIPGAAIVQQCYNLGGANAGYATDNVYCS
AIGRSDQTGQINRLESFNVNLGRIKTSGIDVSLGGTIRLGDDAGAIDLSGTVNWTEKYAV
TNFPGARPMDLAGSIGSSAGSNAGTPAAFPEWRAQANLTYRNGPFQVGVQYRYIDKMIDV
SAIGIPNSTAIGTPAYHYVDLNTQLKIDERLTFRLGVTNLTDKQPPVYTSFYQSNTYPGV
YDVLGRSFYAGATVKF
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgctgacggttcgtggaacatcctccgttcggctccgctgctggctgctgctcggcagc
gcgatgctcggttcgcccgctctcgcgcagggcgtctcgcccgtgcccgacgctgcgtcg
gcgccggccgaggacatcgtcgtcaccggctcgcgcatcgcccgcaaggacctgacgtcg
agcagcccgctggtcgcgatcgcgccgagcgcgctcaagaccaacgcgtcggtcacgctc
gacgacacgctcacccgcctgccgcaggtgacgccctcctatggctccggatcgaacgac
acctcgaccggcggcacgaccacggtcgcgctgcgcggcctgggggcgcagcgcaccctg
gtcctgctcaacggccggcggctgacggcgggcacctataccggcgcggtcgacctcaac
atgatcccgaccgcgctgatcgagtcgatcgaggtgatcaccggcggcgcttcggcggcc
tatggatcggacgcgatcgcgggcgtcatcaacttccgcctcaagaagaatttcgagggc
gtccagctcgacggccagaccggcatcaccagccgcggcgacggcttcacctccagcctg
tcgctgacggcgggcggcaacttcgccgacgatcgcggcaatgcggtgctctcggtcgac
tatgccaagcgccgcggcgtcagcaaccgttcgcgggccttctcgcgcatcagccgcccg
tcgggcgcgctgccgttcggcgtctatgtgccgagcgcgctcaacctgccggccgccggc
gcggtcgacggcgtgttcgcgggctatggcgtcgcgccgggcagcgtcggccccaacagc
aacctgtcgttcaacgccaacggatcgctgttcgcgccgaccagcggcatcaactatgac
ggcagcggccaggacatcgtccgcctcggcaacggtgtcttctacaattcgaccggggtc
agcggcctcaccatcccgctcgagcgcttcggcctgttcggccgcgccgaatatgaggtg
gccgacgacatcaacgtctatgccgaaggcggctaccagcatttcacctccagcctggtg
ttcgggcccggcttcaacacgctgacggtgccgaccaccaatcccttcatccccgacgac
ctgcgcaccgtgctggcgtcgcggccgaacccgaacgcgtccttctccgtgctgcgccgc
tatgccgatgtcgggcagcggacggccgacttcaccaccaacagctatcgcctgctcgcc
ggcgtcaccggccggatcgaggcgatcgacggcacgttcgacgtgttcgccagccgtggc
gagcagaccgtcgaccgccgcgaccacaacggcgtcaacctgaccacgctgaacgcgctg
atcaacgcggccgacggcggcgccagccagtgcgcgggcggctatgatcccttcgcgctc
aacggcggcgcggcctgtgcgacgctgctgcggtcgaccacgatccgcaacaccaagttc
aagcagaattatgtcgaggcgaacgtccagggccgcctcttctcctggtgggcaggcgac
gtccgcttcgcgctcggcgccgaccgccgtagcgacagctacgacttccagcccgacacc
ggcgtccgcaccggtcagatattggggatcgagggcgtcggcgtcccggcggtcaacggc
agcgtcaccgtcaaggaggtgttcggcgagctgctggtgccgatcctgcgcgatctgccg
ctggtcaaggcgttcgacgtcaccctgggctaccgctattcggactatgacctgtcgggc
ggcgtcgacgcctaccggatcgagggcgactggcgggtgatcgacgcgctgcgcatccgc
ggcggcttctcccgcgcggtgcgcgcgcccaacgtctccgaactgttcaccccgcagagc
ccgctgaccccgatcatcggcgcgccgggcgcgccggggcagggcgacccctgcgacgtg
cgcagcgcctatcgcaccggcgcgaacgcggcgcaggtccgcgccctctgtctggcgcag
ggcgtgccgggccagatcatcgacagctacaccttcaacaacacccaactcgtcgacggc
ggcatcaccggcggcaatcccaagctgaagccggaaagcgccaacacctacacgatcggc
gcggtgctgacgccgcgcctaccgtcctcgatcctgtccaacctgtcgctgtcggtcgat
tattacagcatcgacctgaagaaggcgatcggtgcgatcccgggcgccgcgatcgtccag
caatgctataatctgggtggcgccaatgccggctatgcgaccgacaacgtctattgttcg
gcgatcggccgtagcgaccagaccggccagatcaaccggctggaatcgttcaacgtcaat
ctcggccggatcaagacgtcgggcatcgacgtgtcgctgggcggcacgatcaggctgggc
gacgacgccggcgcgatcgacctgtcgggcacggtcaactggaccgagaaatatgccgtc
accaacttcccgggggcgaggcccatggatctcgccggttcgatcggcagctcggcgggc
agcaatgcggggacgccggcggccttccccgaatggcgcgcgcaggccaacctgacctat
cgcaacggcccgttccaggtcggcgtccaatatcgctacatcgacaagatgatcgacgtg
tcggcgatcggcattcccaattcgaccgcgatcggcacgccggcctatcattatgtcgat
ctcaacacgcagctcaagatcgacgagcgcctcaccttccggctgggcgtgaccaacctg
accgacaagcagccgccggtctataccagcttctatcagtccaacacctatccgggcgtc
tacgacgtgctgggccgcagcttctacgccggggcgacggtcaagttctga
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