Rhizorhabdus wittichii RW1: Swit_4371
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Entry
Swit_4371 CDS
T00538
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01896
medium-chain acyl-CoA synthetase [EC:
6.2.1.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00650
Butanoate metabolism
swi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Swit_4371
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
swi01004
]
Swit_4371
Enzymes [BR:
swi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
Swit_4371
Lipid biosynthesis proteins [BR:
swi01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
Swit_4371
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABQ70709
UniProt:
A0A9J9HFM3
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Position
4825156..4826742
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AA seq
528 aa
AA seq
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MLDLGDRPASFNFTRDVMGRWAELRPDDPAMIWTDPAGTVIERSFAEMAVAASRAAAVLT
EAGVGRGDTVLILLNREIEWWELMLGCIAIGAIASPGTTQLMAKDIAYRHQAAAARCVVA
SGEMAERVDAALAGEDVARLHVGGPRPGWIDHAERRAAATPIAAAADTGFDEDALCYFTS
GTTGQPKMTIHTHGYMLAHRITGSYWLDLKPGDLHWNLSDTGWAKAAWSSLFAPWLMGAT
IFVHHSSGFDPVATLDLLERMPVTTLCAPPTAYRMFVRSDLTGRRFDTLRHCVSAGEPLN
PEVIDLWKAATGRDIHDGYGQTETVLLCANRTGAARQGSMGRPAPDFDLAVIDGEGKRLP
ADAEGDVALRIAEGHPPGLFARYRDDPQRTADTKRHGWYLTGDRAIVDADGYFWFVGRSD
DVILSSGYRIGPFEVESALFEHPAVAESAVVSSPDPTRGEVVKAFVVLAAGFEPSDALVG
MLQDHVKSTTAPYKYPRKIEFVASLPKTVSGKIRRKELRDREWERGAA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgctggatctgggggaccggcccgcctccttcaacttcacccgcgacgtcatggggcgc
tgggccgagctgcggcccgacgaccccgccatgatctggaccgatcccgccggaacggtg
atcgagcgcagcttcgccgagatggcggtcgccgcgtcccgcgccgcggcggtgctgacg
gaagccggagtggggcggggcgacaccgtgctgatcctgctcaaccgcgagatcgaatgg
tgggaactgatgctcggctgcatcgcgatcggcgcgatcgcctcgccgggcacgacccag
cttatggccaaggacatcgcctatcgccaccaggccgccgccgcgcgctgcgtggtggcg
agcggcgagatggcggagcgggtcgacgcggcgctggccggggaggacgtcgcccgcctg
cacgtcggcggaccgcgtccgggctggatcgaccatgccgagcggcgggcggcggcgacg
ccgatcgcggcggcggccgacaccggcttcgacgaggatgcgctgtgctatttcaccagc
ggcaccaccggccagccgaagatgacgatccacacgcacggctatatgctcgcgcatcgc
atcaccggctcctactggctcgacctcaagcccggcgacctgcactggaacctgtccgac
accggctgggccaaggcggcgtggagcagcctgttcgcgccctggctgatgggggcgacg
atcttcgtccaccactcgtccggcttcgatccggtcgcgacgctcgacctgctcgaacgc
atgccggtgacgacgctgtgcgcgccgccgaccgcctatcgcatgttcgtccgcagcgac
ctgaccggccgccgcttcgacactctgcgccattgcgtgagcgcgggcgagccgctcaac
cccgaggtgatcgacctgtggaaggcggcgaccggccgcgacatccatgacggctacggc
cagaccgagacggtgctgctctgcgccaaccggacgggcgccgcacggcagggatcgatg
gggcggcccgcgcccgatttcgacctggcggtgatcgacggggaggggaagcggcttccc
gccgatgccgagggcgacgtcgcgctccgcatcgcggaggggcatccgcccggcctgttc
gcccgctaccgcgacgatccgcaacggaccgccgatacgaagcgccacggctggtacctg
accggcgaccgggcgatcgtcgatgccgacggctatttctggttcgtcggccggtcggac
gacgtgatcctgtcgtcaggctatcgcatcggtccgttcgaggtggagagcgcgctgttc
gagcatcccgccgtcgccgagagcgcggtggtgtcgagccccgatccgacccgcggcgag
gtggtgaaggcgttcgtcgtcctcgccgccgggttcgagccgtccgacgcgctggtcggg
atgctccaggaccatgtgaaatcaactaccgctccctataaatatccccgtaagatcgaa
ttcgtcgcgagcttgccgaaaacggtgagcggcaagatccgccgcaaggagctgcgcgat
cgcgaatgggagaggggagctgcatga
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