Rhizorhabdus wittichii RW1: Swit_4491
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Entry
Swit_4491 CDS
T00538
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Swit_4491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_4491
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Swit_4491
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
HHH_5
UVR
GIY-YIG
HHH
HHH_2
DUF7508
baeRF_family2
RMMBL
HHH_3
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
ABQ70829
UniProt:
A0A9J9HFU2
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Position
4933770..4935698
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AA seq
642 aa
AA seq
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MPVSDTIQNDRFNEEKSVYTVRGTDAPDLEAGVAAIRNVLKTLPARPGVYRMQDARGDVL
YVGKARALKNRVANYTQVARLPKRLSRMVAQTRSMTIVTTNSEAEALLLEAQLIKRYRPP
YNVLLRDDKSFPFILLREDHAFPRIQKHRGARRAKGQYFGPFASAGSVTRTLNALQKLFL
LRSCTDSFFANRDRPCLLYQIKRCSAPCVGRIDEADYAELVDDSKAFLAGKSTQVQKKLG
EAMSAAAEAMDYELAAVYRDRLRALTFIQGSQAINAEGVADADVFALDCKAGTVCIQAFF
IRGGQNWGHRAFFPAHTADVPEPEVLASFLMQFYEEVPPPRLVLVGGEPAEAELLAQALG
ERAGRKVQIKVPQRGEQRKLMEQARRNAREALDRRLAESTTQGRIFQEMADLFELEGPPD
RIEVYDNSHIMGTNMVGAMIVAGPEGFRKGSYRKFNIKRPETAPGDDFAMMREVLERRFA
RLEKEDPERRSGEWPDLLLIDGGKGQLGAVCEVLEEMGVQDVPVVGISKGPDRNAGREHF
HLPGGREAMLPPNSPLLFHLQRLRDEAHRFAIGAHRTKRAASFTKSPLDDVPGIGPARKK
ALLMHFGTARAVRAASLEDLERAPGVSSAMARAIHDHFHAGG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgagcgatacgatccagaacgaccggttcaacgaggagaagagcgtctacacg
gtgcgcggcaccgacgcgcccgatctggaggccggcgtcgccgcgatccgcaacgtgctg
aagacgctgccggcgcggcccggcgtctaccggatgcaggatgcgcgcggcgacgtgctc
tatgtcggcaaggcgcgcgcgctcaagaaccgcgtcgccaactatacgcaggtggcgcgc
ctgcccaagcggctcagccgcatggtcgcgcagacccggtcgatgacgatcgtcaccacc
aacagcgaggccgaggcgctgctgctcgaggcgcagctcatcaagcgctatcggccgccc
tacaacgtcctgctgcgcgacgacaaaagcttccccttcatcctgctgcgcgaggaccac
gcctttccgcgcatccagaagcatcgcggcgcgcggcgcgccaaggggcagtatttcggt
cccttcgccagcgccggatcggtgacgcggacgctcaacgcgctgcagaagctgttcctg
ctgcgctcctgcaccgacagcttcttcgccaatcgcgaccggccctgcctgctctaccag
atcaagcgctgctcggcgccctgcgtcggccggatcgacgaggccgactatgccgagctg
gtcgacgactccaaggccttcctcgccggcaagtcgacccaggtgcagaagaagctgggc
gaggcgatgagcgccgccgccgaggcgatggattacgagcttgccgccgtctatcgcgac
cggctgcgcgcgctgaccttcatccagggcagccaggcgatcaacgcggaaggcgtcgcc
gacgccgacgtcttcgcgctcgattgcaaggcgggcacggtctgcatccaggccttcttc
atccgtggcgggcagaattggggccaccgcgccttcttccccgcgcacaccgccgacgtg
cccgagccggaggtgctcgccagcttcctgatgcagttctacgaggaggtgccgccgccg
cgcctcgtcctcgtcggcggcgagccggccgaggccgagctgctcgcccaggcgctcggc
gaacgcgccggccgcaaggtgcagatcaaggtcccccagcgcggcgagcagcgcaagctg
atggagcaggcgcgccgcaacgcccgcgaggcgctcgaccgccggctcgccgaatccacc
acccagggccgcatcttccaggagatggccgacctgttcgagttggaagggccgcccgac
cggatcgaggtgtacgacaacagccacatcatgggcaccaacatggtcggcgcgatgatc
gtcgccgggcccgaggggttccgcaagggcagctatcgcaagttcaacatcaagcggccc
gaaaccgcccccggcgacgacttcgcgatgatgcgcgaggtgctcgaacgccgcttcgcg
cggctcgagaaggaggaccccgaacggcgcagcggcgaatggccggacctgctgctgatc
gacggcggcaagggacagctcggcgcggtgtgcgaggtgctggaggagatgggcgtgcag
gacgttcccgtcgtcggcatctcgaaggggcccgaccgcaatgcggggcgcgagcatttc
cacctgcccggcggacgcgaggcgatgctgccgcccaattcgccgttgctgttccatctc
cagcggctgcgcgacgaggcgcatcgcttcgcgatcggcgcgcaccgcaccaagcgggcg
gccagtttcaccaagagcccgctcgacgacgttcccggcatcggccccgcgcgcaagaag
gcgctgctgatgcatttcggcacggcgcgcgcggtccgcgcggcctcgctcgaggatctc
gaacgcgcgcccggcgtttcgagcgccatggcgcgggcgatccacgaccatttccacgcg
ggcggctga
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