Rhizorhabdus wittichii RW1: Swit_4563
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Entry
Swit_4563 CDS
T00538
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
swi03032
]
Swit_4563
03400 DNA repair and recombination proteins [BR:
swi03400
]
Swit_4563
Enzymes [BR:
swi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Swit_4563
DNA replication proteins [BR:
swi03032
]
Prokaryotic type
DNA Topoisomerases
Swit_4563
DNA repair and recombination proteins [BR:
swi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Swit_4563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ABQ70901
UniProt:
A0A9J9HFK6
LinkDB
All DBs
Position
complement(5020258..5023068)
Genome browser
AA seq
936 aa
AA seq
DB search
MTAPFRGQNTASTNTDPKTLASVPPPIENSDISPISIIDEMKSSYLDYAMSVIVSRALPD
VRDGLKPVHRRILYACQEGGFVPGRPYRKSAKIVGDVMGNYHPHGDSSIYDALARLAQDW
AMRVPLIDGQGNFGSMDPDPPASMRYTEARLAKVAMTLLDDLDKDTVNFTPNYDGSRDEP
QVLPARFPNILVNGAGGIAVGMATNIPPHNLGEVIAACKAYVDNPAISIDELMAIVPGPD
FPTGALILGQSGARQAYHTGRGSIIMRSRHEVEESRGDRRSIVLTEIPYQVGKSGLVEKI
AEAAKDKRIEGISDIRDESNRQGVRIVMDLKRDATPDVVLNQLWRHTPAQTSFPANMLAI
RGGRPETLNLRDIVESFVKFREEVITRRSKFELNKARERAHILLGLVIAVTNLDEVVRII
RRSASPAEARAALISREWPRGEIESYIKLVEAVDTIGDAPTYQLSEVQVRAILDLRLHRL
TALGRDEIGDELAKLAESIAELLEILGNRVRLYQVMVEEFDAILVEFATPRRTEIAPAGD
DIDDEDLIEREDMVVTVTHGGYIKRTPLEAFRAQRRGGKGRSGMATKDEDAVTELFVTST
HTPVLFFSNHGKVYRKKVWRLPEGAPQARGRPMINLLPLADGEKITTVLPLPEDEESWST
LHVVFATAHGNVRRNSMDAFANVPTNGKFAMRFDEDATDRLIGVALLTEQDDVLLATRGG
KAIRFASTDVREFQSRTSTGVRGILLKGDDEVISLSILKGFDASTDERDAYLRAAPWKDN
EADPTLSAERMAEFEAAEEFILTVCANGYGKRSSAYEYRRTGRGGQGIGNIDNLERNGPV
VASFPAHNGEQLMLVTDQAKLIRLSVGDTRVIGRNSAGVRLFNVSDNEHVVGAARIEESD
DEAEADLGDGTGEIAPADDAVVGEDLADGGEASGDE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccccgttccggggccagaacaccgcttcaacgaacacggacccaaagactttg
gccagcgtaccgccgcccatcgaaaacagcgacatttccccgatctcgatcatcgacgag
atgaagtcgagctatctcgactatgccatgtcggtgatcgtgtcgcgcgcccttcccgac
gtgcgcgacgggttgaagccggtgcaccgccgcatcctctatgcgtgccaggagggcggc
ttcgtcccgggccggccctaccgcaagtcggcgaagatcgtcggcgacgtgatgggcaac
tatcacccgcacggcgacagctcgatctacgacgcgctcgcgcgcctcgcccaggattgg
gcgatgcgggtgccgctgatcgacggccagggcaatttcggctcgatggaccccgatccg
ccggcgtcgatgcgctataccgaggcgcggctcgccaaggtggcgatgaccctgctcgac
gacctcgacaaggacacagtcaacttcacgccgaactatgacggctcgcgcgacgagccg
caggtgctgccggcgcgcttcccgaacatcctggtcaacggcgccggcggcatcgcggtc
ggcatggcgaccaacatcccgccccacaatctcggcgaggtgatcgcggcctgcaaggcc
tatgtcgacaatcccgcgatctcgatcgacgagcttatggcgatcgtgcccggcccggac
ttcccgaccggcgcgctgatcctcggccagtcgggcgcgcggcaggcctatcataccggg
cgcggctcgatcatcatgcgctcgcgccacgaggtcgaggaaagccgcggcgaccgccgc
tcgatcgtcctgaccgaaatcccctaccaggtcggcaagtcgggcctggtcgagaagatc
gccgaggcggcgaaggacaagcggatcgagggcatctccgacatccgcgacgagtcgaac
cgccagggcgtccgcatcgtcatggacctgaagcgcgacgcgaccccggacgtggtgctc
aaccagctctggcgccacaccccggcgcagaccagcttcccggccaacatgctcgcgatc
cgcggcggccggcccgagacgctgaacctgcgcgacatcgtcgaatccttcgtcaagttc
cgcgaggaggtcatcacccgccgctcgaagttcgagctgaacaaagcgcgcgagcgggcg
catatcttgctcggcctcgtcatcgcggtcaccaacctcgacgaggtggtgcggatcatc
cgccggtcggcgagccccgccgaggcgcgcgccgcgctgatctcgcgcgaatggccgcgc
ggcgagatcgaatcctacatcaagctggtcgaggcggtcgacacgatcggcgacgcgccg
acctaccagctcagcgaggtccaggtccgcgcgatcctcgacctgcgcctgcaccgcctg
accgcgctcggccgcgacgagatcggcgacgaactcgccaagctcgccgaatcgatcgcc
gagctgctcgagatcctcggcaaccgggtccgcctctaccaggtgatggtcgaggaattc
gacgcgatcctggtcgagttcgcgacgccccgccgcaccgagatcgcgcccgccggcgac
gacatcgacgacgaggacctgatcgagcgcgaggacatggtcgtcaccgtgacccacggc
ggctacatcaagcgcaccccgctcgaagccttccgcgcgcagcgccgcggcggcaagggc
cgctcgggcatggcgaccaaggacgaggacgccgtcaccgagctgttcgtgacgagcacc
cacacgccggtgctgttcttctcgaaccacggcaaggtctatcgcaagaaggtgtggcgc
ctgcccgagggcgcgccgcaggcgcgcggccggccgatgatcaacctgctgccgctggcc
gacggcgagaagatcaccaccgtcctgccgttacccgaggacgaggagagctggagcacg
ctccacgtcgtcttcgcgaccgcgcatggcaatgtccgccgcaactcgatggacgccttc
gccaatgtgccgaccaacggcaaattcgcgatgcgcttcgacgaggacgccaccgaccgg
ctgatcggcgtcgcgctgctgaccgagcaggacgacgtcctgctcgcgacccgcggcggc
aaggcgatccgcttcgcctccaccgacgtgcgcgagttccagagccgcacctcgaccggc
gtgcgcggcatcctgctcaagggcgacgacgaggtgatctcgctgtcgatcctcaagggc
ttcgacgcctccaccgatgagcgcgacgcctatctgcgcgccgcgccatggaaggacaac
gaggccgacccgacgctgtcggccgaacgcatggccgagttcgaggccgccgaggagttc
atcctgacggtctgcgccaacggctatggcaagcgcagctcggcctatgaatatcgccgg
accggccgtggcggccagggcatcggcaatatcgacaatctggagcgcaacggcccggtc
gtcgccagcttcccggcgcataatggcgagcagctcatgctcgtcaccgaccaggccaag
ctgatccgcctctcggtcggcgacacccgcgtcatcggccgcaactcggccggcgtccgc
ctgttcaacgtctccgacaacgagcatgtcgtcggcgcggcgcggatcgaggagagcgac
gacgaggccgaggccgacctgggcgacggcaccggcgagatcgcccccgccgacgacgcg
gtggtgggcgaggacctggccgacggcggcgaggcatcgggcgacgaatga
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