Rhizorhabdus wittichii RW1: Swit_4617
Help
Entry
Swit_4617 CDS
T00538
Name
(GenBank) hypothetical protein
KO
K00316
spermidine dehydrogenase [EC:
1.5.99.6
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi00330
Arginine and proline metabolism
swi00410
beta-Alanine metabolism
swi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Swit_4617
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Swit_4617
Enzymes [BR:
swi01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.6 spermidine dehydrogenase
Swit_4617
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NAD_binding_8
Thi4
DAO
Amino_oxidase
FAD_oxidored
MCRA
FAD_binding_2
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
ABQ70955
UniProt:
A0A9J9LGC5
LinkDB
All DBs
Position
complement(5080150..5082102)
Genome browser
AA seq
650 aa
AA seq
DB search
MNGQGEEKTRPSVTRRDFVGGTMIGSGAALLTMGAPAMTTSAQAQTVPSPLTGLGPDWTG
PGGVGDYADKNGNTHVVVNAAHGHIRNGDLDKRIANAPLVDDLYDLIIVGAGISGLTSAF
VAARDNPSAKILILDQHAIFGGEAKQNEFDVDGYRLTAPQGSTGIVVPFAPAEKFGFGSP
FLKELGYPEEFVYQEPKNLSQPILVPRDAWGPMHISWEMADTAFYYEGKGMVKNPWRNGF
RDAPIPEKVKKALVDLELYRTPPVRDDWAQWLDTMTYKEFLLNVAEVPADCIDGVLDVLS
PVMASMGCGQGGDVISAYSAYNYLMPGVIGYYRYQHGGADPTDTIYLATFPGGNTIAAKR
FLKLAKPEALSGDDSLHGLMESQVRWDQLDLPGQKVRLRLSSTVFSVVHEGKPAKAKTVR
VTYDKDGKLVSARGKAVICAGQQHANRRICHDIDAQYRTAMQEFHHAPMLVINVALRNWK
FLDKLGVAGIRWFEGLGWWTSLRRNLVIDGHEPQPLDPDKPVVLTQYIPFLIPGVEWPDQ
CTQARMMLFSMSYADIEAQVRDQFTKMFGPYGFDAERDIAGIITNRQGHAYMVAPPGFHF
GRNGKKAAKDVLREPWHRIAFGHSELAGAQMWETAVLEGERAAKQVLPML
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacaaggggaagaaaagaccaggccgtcggtgacgcggcgggacttcgtcggc
ggcaccatgatcgggtcgggcgcggcgctgctgacgatgggcgcgccggcgatgacgacg
agcgcgcaggcgcagaccgtgccgagcccgctcaccgggctgggccccgactggaccggc
cccggcggcgtcggcgactatgccgacaagaacggcaacacccatgtcgtcgtcaacgcc
gcccacggccatatccgcaacggcgacctcgacaagcggatcgccaacgccccgctggtc
gacgacctctacgacctgatcatcgtcggcgccggcatctccggcctcacctccgccttc
gtcgccgcgcgggacaacccgtccgccaagatcctgatcctcgaccagcacgccatcttc
ggcggcgaggccaagcagaacgagttcgacgtcgacggctatcgcctgaccgcgccgcaa
ggatcgaccggcatcgtcgtccccttcgcgccggccgagaaattcggcttcggcagcccg
ttcctcaaggagctcggctatcccgaggagttcgtctaccaggagccgaagaacctgtcg
cagccgatcctggtgccgcgcgacgcctgggggccgatgcacatctcctgggagatggcc
gacaccgccttctattatgaaggcaaggggatggtgaagaatccctggcgcaacggcttc
cgcgacgcgccgatccccgagaaggtcaagaaggcgctggtcgacctcgaactctaccgc
accccgccggtccgcgacgactgggcgcagtggctcgacacgatgacctacaaggaattc
ctgctcaacgtcgccgaggtgccggccgactgcatcgacggcgtgctcgacgtgctgagc
ccggtgatggccagcatgggctgcggccagggcggcgacgtcatctccgcctattcggcc
tataattacctgatgccgggggtgatcggctattatcgctaccagcatggcggcgccgat
ccgaccgacaccatctacctggcgaccttccccggcggcaacacgatcgccgcgaaacgc
ttcctgaagctcgccaagcccgaggcgctgagcggcgacgacagcctccacggcctgatg
gagagccaggtccgctgggaccagctcgacctgcccggccagaaggtgcggctgcgcctg
tcgagcacggtcttctcggtcgtccatgagggcaagcccgccaaggcgaagacggtgcgc
gtcacctatgacaaggacggcaagctggtcagcgcgcgcggcaaggcggtgatctgcgcg
ggacagcagcacgcgaaccgccgcatctgccacgacatcgacgcccagtatcgcacggcg
atgcaggaattccaccatgcgccgatgctggtgatcaacgtcgcgctcaggaactggaag
ttcctcgacaagctcggcgtcgccggcatccgctggttcgaggggctaggctggtggacc
agcctgcgccggaacctcgtcatcgacgggcatgagccgcagccgctcgatccggacaag
ccagtggtgctgacgcagtacatccccttcctgatccccggcgtcgaatggcccgaccag
tgcacccaggcgcggatgatgctcttctcgatgtcctacgccgacatcgaggcgcaggtg
cgcgatcagttcaccaagatgttcgggccctatggcttcgacgccgagcgcgacatcgcc
gggatcatcaccaaccggcagggccatgcctatatggtcgcgccgcccggcttccatttc
ggccgcaacggcaagaaggcggcgaaggacgtgctgcgcgaaccgtggcaccgcatcgcc
ttcggtcattcggaactggcgggcgcgcagatgtgggagaccgcggtgctggagggcgag
cgcgcagcgaaacaggtcctgccgatgctgtga
DBGET
integrated database retrieval system
