Rhizorhabdus wittichii RW1: Swit_4625
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Entry
Swit_4625 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4625
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_4625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Clostridium_P47
Motif
Other DBs
NCBI-ProteinID:
ABQ70963
UniProt:
A0A9J9HFZ8
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All DBs
Position
complement(5090045..5092306)
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AA seq
753 aa
AA seq
DB search
MNKGQLLTSVAAFAFLGMWAMPAAAQTPASSETDDAEIVVFGKGETRQVQTVTAVDIAVA
TPGTSPLKVLEKLPGVSFQSANALGSNEWSSRISIRGFNQNQLGFTLDGVPLGDMSYHNF
NGLHISRAIASENIGRTTLAQGSGALSTASSSNLGGTVQFFSKAPSPDFGLDGEVSYGSE
NAYRLFGRLETGDLGNGIMGYVSGSWLDAPKWKGQGKQEAWSINSKLVVPLGERGQVAAF
VNYSDFKDDDYMDMSLSLIRKYGWNWDYIRNDYPTAMAIATNLQNGVYCANYAGYSQQIC
GDDTYYDAYGLRKDFLAGANIDYELADAVTLKLTPYYHRHRGISTWFTPYTPTPGGSPMS
VRGATYAINRGGATGSLSFTFGDHQLEIGGWYEYNRYRAGRPYFPLAASNVASIGKREWP
KNPFASDYSYNFKIKTYQYFIQDTWNLTPELKMNYGFKGIRNTVINEYNPANSPNRDTSG
LLRAKDMFIPQIGVNYAVSRAFELFASYTENMRAFTTEPFLTSRAGFLAVKDVIKPETSW
TLEGGLRFHLRNFEGSIAGYHVKFDDRLLSVQPCAIIIGCPSILSNVGSVTTNGIEMAGT
YRLTRALSLYGAYAYTDAQYDDDILSGVLYATKNKTVVNTPKHLINGEIAYDDGALFGRI
SANYQSKRYYTYINDNSVKGRALVDLSAGYRFPEGGGLLDGLELQANVTNLFDKKYISTV
GQTALKFSDPGGNVQSMLVGTPRQVFLSLRKHF
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtcagcttctcacgagcgtcgcggctttcgccttcctcggcatgtgggcg
atgcccgccgccgcccagacgccggcatcgtcggaaaccgacgatgccgagatcgtggtg
ttcggaaagggtgagacccgccaggtacagacggtgaccgcggtggatatcgccgtcgcc
acgcccggcacgagcccgctcaaagtgctggaaaaattaccgggcgtctcgtttcagtcc
gcgaatgccctcggcagcaacgaatggtcgagccgcatttcgatccgtggcttcaaccag
aaccagctcggcttcacgctcgacggcgtaccgctgggcgacatgagctatcataatttc
aacgggctccacatcagccgcgcgatcgcctccgagaatatcggcaggaccacgctcgcg
caggggtccggcgcgctcagcaccgcctccagctcgaacctcggcggcaccgtgcagttc
ttcagcaaggcgccgtcacccgacttcggcctcgatggagaggtgagctacggcagcgag
aacgcctaccgcctgttcggccggctcgaaaccggcgacctcggcaacggcatcatgggc
tatgtcagcggttcctggctggacgcgccgaaatggaagggccagggcaagcaggaggcc
tggtcgatcaacagcaagctggtcgtgccgctcggcgagcgggggcaggtcgccgccttc
gtcaactattccgacttcaaggacgacgactatatggacatgtcgttgtccctgatccgg
aaatatgggtggaactgggattatatccggaacgactatccaacggcgatggcgatcgcg
accaatctccagaacggcgtctattgcgccaattatgcgggatattcgcagcagatctgc
ggcgacgacacctattatgacgcctatggcctccgcaaggatttcctggccggcgccaat
atcgactatgaactggccgatgcggtcaccctcaagctgaccccatactatcatcggcat
cgcggcatcagcacctggttcacgccgtacacgccgaccccgggcggctcccccatgtcg
gtgcgcggggcgacctatgcgatcaatcgcggcggcgcgaccggctccctgtcgttcacc
ttcggcgaccatcagctggagatcggcggctggtacgaatataatcgctaccgcgccggc
cgcccctatttcccccttgccgcgtccaacgtcgcgagcatcggcaagcgcgagtggccg
aagaaccccttcgccagcgactattcgtacaatttcaagatcaagacctaccaatatttc
atccaggacacctggaacctgacccccgaactcaagatgaactacgggttcaaggggatc
aggaacaccgtcatcaacgagtataatccggcgaacagcccgaaccgggacacgtccggc
ctgctgagggccaaggacatgttcatcccgcagatcggcgtcaactacgccgtctcgcgc
gcgttcgagctgttcgccagctacaccgagaacatgcgcgccttcaccacggagcccttc
ctgacgagccgggcgggcttcctcgcggtcaaggacgtgatcaagcccgagacctcctgg
acgctggagggcggcctgcgcttccacctccggaacttcgagggctcgatcgccggctat
cacgtcaagttcgacgacaggctgctttcggtgcagccctgcgcgatcatcatcggctgt
ccgtcgatcctgtccaatgtcggctcggtcaccaccaacgggatcgagatggcggggacc
tatcggctgacccgcgccctgtcgctgtacggcgcctatgcctatacggatgcgcaatat
gacgacgacatcctgagcggcgtgctctacgccacgaagaacaagacggtggtcaacacg
ccgaagcacctgatcaacggcgagatcgcctatgacgacggggccctgttcggccggatc
tccgccaattaccagagcaagcgctattacacctacatcaacgacaacagcgtcaagggc
cgcgcgctggtcgatctttcggccggctatcgcttcccggaggggggcggcctgctcgac
ggcctcgagctccaggccaatgtgaccaacctgttcgacaagaaatatatcagcacggtg
gggcagaccgcgctgaaattctccgatccgggcgggaacgtccaatcgatgctcgtgggg
acgccccggcaggtcttcctgtcgcttcgcaagcatttctga
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