Rhizorhabdus wittichii RW1: Swit_4751
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Entry
Swit_4751 CDS
T00538
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
swi
Rhizorhabdus wittichii RW1
Pathway
swi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Swit_4751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
swi03016
]
Swit_4751
Enzymes [BR:
swi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Swit_4751
Transfer RNA biogenesis [BR:
swi03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Swit_4751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABQ71088
UniProt:
A5VFM2
LinkDB
All DBs
Position
5228555..5229946
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AA seq
463 aa
AA seq
DB search
MLAGPVAVAREPRGRRLRLVAGEQGAQRGEVERRLGRLGAVDPELVDVDFHRVPRCCPVS
AQETASRGKSLGENRIILRALARPAMGAPMNPEFQLEGRAPGSLAGARIVVAMSGGVDSS
VVAALAAASGAETIGVTLQLYDHGAAVGRTGSCCAGQDIRDARAVADRLGIAHYVFDYES
RFRDSVIADFADEYAAGRTPIPCVRCNQGVKFTDLFGIARDLGADCLATGHYVRRVVGAG
GRAELHRAADPARDQSYFLFATTRDQLDYLRFPLGAMPKPRVREIAAELGLGVAAKPDSQ
DICFVPDGDYASIVKRLRPEAAEEGEIVGLDGRVLGRHRGLIHFTVGQRRGIEIGGSPEP
LYVVRLEPETKRLVVGPRRALAVSAAMLDDVNWIGEGYEGPLTAKVRSLAKPVPARFEDG
AVRFDQPEYGVAPGQAAVLYAGDRVLGGGWIRATVPAELAVAA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccggtccagtcgccgtcgcgcgcgagccgcgcggtcggcgtctccgcctggtg
gcgggcgagcagggtgcacagcgtggcgaagtcgagcggcgcctcggtcggctcggcgcc
gtcgacccggaacttgttgatgtcgattttcatcgcgtgccccgctgttgtcccgtgtca
gcacaagaaacggcttcgcggggcaaatctttaggggaaaatcgcataattttgcgggcg
ttggcccgacctgctatgggcgccccgatgaacccggaattccagctcgaaggccgcgcg
cccggctcgctcgccggcgcccgcatcgtcgtcgccatgtcgggcggcgtcgacagttcg
gtggtcgccgcgctcgccgccgcgagcggcgccgagacgatcggcgtgaccctccagctc
tacgatcacggcgccgccgtcggccgcaccggaagctgctgcgcggggcaggacatccgc
gacgcgcgggccgtcgcggacaggctcggcatcgcccattatgtgtttgattatgaaagc
cgtttccgggattcggtgatcgccgacttcgccgacgaatatgccgccgggcggaccccg
atcccctgcgtccgctgcaaccagggggtgaagttcaccgacctgttcggcatcgcccgc
gacctcggcgcggattgcctggcgaccggccattatgtacgccgcgtggtgggggcgggc
ggccgcgccgagctgcaccgcgccgccgatccggcgcgggaccagagctacttcctgttc
gccaccacgcgcgaccagctcgactatctgcgcttcccgctcggcgcgatgcccaagccg
cgcgtccgcgagatcgcggccgagctcgggctgggggtcgcggccaagcccgacagccag
gatatctgcttcgtccccgacggcgattatgccagcatcgtcaagcgcttgcgccccgaa
gcggcggaggagggcgagatcgtcggcctcgacggccgggtgctcggccggcatcgcggg
ctgatccatttcaccgtcggccagcgccgcgggatcgagatcggcggcagcccagagccg
ctctacgtcgtccggctggagccggagacgaagcgtctcgtcgtcggcccgcgccgcgcg
ctcgccgtgtcggcggcgatgctcgacgacgtcaactggatcggcgagggctatgagggg
ccgctgaccgccaaggtccgctcgctcgccaagccggtcccggcccggttcgaggacggc
gccgtccgcttcgaccagcccgaatatggcgtcgcccccggacaggcggcggtgctctac
gcgggcgaccgcgtgctcggcggcggctggatccgcgcgaccgtcccggccgagcttgcc
gtagcggcctga
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