Rhizorhabdus wittichii RW1: Swit_4828
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Entry
Swit_4828 CDS
T00538
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4828
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_4828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABQ71165
UniProt:
A0A9J9LGI6
LinkDB
All DBs
Position
5317246..5321424
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AA seq
1392 aa
AA seq
DB search
MGDEIAMVEEKVEAWRRRHPILRFVAIGLLSVLLLLSAAIWMLDSAPGHRLIIDRIGALR
PSSGLRIRIGRIDGSIWNRATLRDLRLYDTQGLFLEAPEIALDWRPAAWVANKLWIRSVD
TDLLILHRKPKLQPSPKKGPLLPGFDIHVGRLRVAKLRLEPPVAGRRHIVRIAAEADIHD
GRVLLKLDAASSARDRLTLQLDSEPDRDRFDLDARLVGPADGVIAGATRWKKPVDGVISG
TGRWSAWKGRATMDVGDIRLVDLRLAADRGKYALDGSLAPSRLLSGKLQRLSDPTIRING
AATLVDRQLGGTLSIATPALEIAASGTLDLAASAFDAVVVDAKLLRPQAMFPNMTGRNIK
LHASFDGPFGTADYAYALTAEHVAFDTTGFDIVRAEGKGKLSDPPVKLPVRLSARRVTGV
GDVAGGILGNLKVDGVLQVTAQKVTGEKLRLSSDKLAGQLSLSLDLRTGAYDVALTGKLL
RYFIPGIGIVDVNSELKVIPGAGGRGTVVAGRGRAWVRRFDNAFLRSLAGGLPSIDTQLR
RGPDGVLHFERLVLTGPGIRLTGNGFRRRDGSFYFKGSGTQAQYGPVQITLDGDISRPKI
DLVLASPVQALGLVNVAVKLDPTAQGFAYSATGGSHLGPWGSSGAILLPANQPATIQVAT
FAVSGAKGSGSLRSDPNGFTGRIDLADGTVTGPLLFSVEQGLQKIEGHLRARRATIGAAV
PFTVGRGRLDGTVLLDPAGVQVNATVALFGTTMRGITLGRGRATIALKGESGTISANLAG
SRGRGFELATVARLTPDSVSLTADGTIDQKPIRLDGPAVLRREPDAWRLEPTTLGFGSGK
ATLAGRFGSATNEVKAGIQAMPLSVLDIFYPGLGLSGVATGDVDYRLQRGARIPTGRVNL
KIRGLSRSGLVLTSRPADVALAGVLTENVAAARAVVSSGGKVIGRGQARITNLPATGALP
DRLMSGNLLAQLRYGGPADTLWRLIGVETIDISGPVSIGADISGTGANPVIRGSLRSTQA
RLESAVTGTVITNIAATGRFNGSRLLVDKLSGQTRGGGTIAGRAAFDFAAEKGIGMDVSL
DAQNAQLINRDDIGAIVTGPITIRSDGGSGTIGGDVRLVRGRFQLGRAAAVATIPQFDTV
ELNRPDDEDDVQRPLSWKLDIDVDSRNQLAVTGLGLDSEWRGKLHLGGTIDNPAINGRVD
LVRGGYEFAGRRFDLDRGAIRFLGETPPDPLLDITAKANLNGVSATITVSGTGQKPEIHF
SSIPALPEDELLSRLLFGTSITNLSAPEALQLAAAVGSLRGGGGGLNPINAVRRAAGLDR
LRILPADPTIGIGTSIAAGKYIGRRTYVEVISDGQGYSATRIEFQITRWLSLLSSISTIG
RQSASVKVSKDY
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgagatcgccatggtcgaggagaaggtggaggcctggcgccgccgccatccg
atcctgcgcttcgtcgcgatcggtctgctgtcggtgctgctgctgctctccgccgcgatc
tggatgctcgacagcgcccccggccaccggctgatcatcgaccggatcggtgcgctcagg
ccgtcgtcgggcctgcgcatccgcatcggccggatcgacggctcgatctggaaccgcgcc
acgctccgcgacctgcgcctctacgacactcagggcctgttcctggaagcgcccgagatc
gcgctcgactggcggcccgccgcctgggtcgcgaacaagctgtggatcaggagcgtcgat
accgacctgctgatcctgcatcgcaagccgaagttgcagccgtcgcccaagaaggggccg
ctgctgccggggttcgacatccatgtcgggcggctgcgcgtggcgaagctgcggctcgaa
ccgccggtcgccgggcggcgccatatcgtccgcatcgcggcggaggcggacatccatgac
ggccgggtgctgctcaagctcgatgccgcgtcgagcgcgcgcgaccggctgacgctccag
ctcgattcggagcccgaccgcgaccgcttcgacctcgacgcgcggctggtcggtccggcc
gacggcgtcatcgccggggcgacgcgatggaagaagcccgtcgacggcgtcatctccggc
accgggcgctggtccgcctggaagggccgggcgacgatggacgtcggcgatatccggctg
gtcgacctgcggctggccgccgaccgcggcaaatatgccctcgacggctcgctcgcgccc
agccgcctgctgtcgggcaagttgcagcgcctgtccgatccgacgatccggatcaacggc
gcggcgacgctggtcgaccggcagctcggcggcacgctgtcgatcgcgacgcccgcgctg
gagattgccgcctcgggcacgctcgacctggccgcttcggcgttcgacgcggtcgtcgtc
gacgccaagctgctgcgtccccaggcgatgttccccaatatgaccggacgcaacatcaag
ctgcacgccagcttcgacgggccgttcggcacggcggactatgcctatgcgctgaccgcc
gagcatgtcgccttcgacacgaccgggttcgacatcgtccgcgccgagggcaagggcaag
ctgtccgatccgccggtcaagctgccggtccgcctgtcggcgcggcgggtgacgggggtc
ggcgacgtcgccggcggcatcctcggcaatctcaaggtcgacggcgtgttgcaggtgacc
gcgcagaaggtgaccggcgagaagctgcggctcagctcggacaagctggcggggcagctc
tcgctcagcctcgacctgcggaccggcgcctatgacgttgccctgacaggcaaattgctg
cgctatttcatccccggcatcggcatcgtcgacgtcaattcggaactgaaggtcattccc
ggcgcgggcgggcgcgggacggtggtcgctgggcgcgggcgcgcctgggtgcgccggttc
gacaatgccttcctgcgatcgctggccggcgggctgccgtcgatcgacacgcagctccgg
cgcggaccggacggcgtgctccatttcgagcggctggtgctgaccgggcccggcatccgc
ctgaccggcaacggcttccgccgtcgcgacggcagcttctacttcaagggcagcggcacc
caggcgcaatatggcccggtccagatcaccctcgacggtgatatcagccggccgaagatc
gacctcgtcctcgccagcccggtgcaggcgctgggcctcgtcaacgtcgcggtgaagctc
gacccgaccgcgcagggcttcgcctatagcgcgacgggcggctcgcacctcggcccgtgg
ggcagcagcggcgcgatcctgctgccggccaaccagcccgccaccatccaggtcgcgacc
ttcgcggtcagcggcgccaagggcagcggcagcctgcgctccgatccgaacggcttcacc
gggcgcatcgacctggccgacggcaccgtcaccggcccgctgctcttctcggtcgaacag
ggcttgcagaagatcgaggggcatctgcgcgcccgccgtgccaccatcggggcggcggtg
ccgttcacggtcggccgtgggcggctcgacggcaccgtgctgctcgatccggccggggtg
caggtcaacgccaccgtcgccctgttcggcacgacgatgcgcggcatcaccctcggccgc
ggccgcgcgacgatcgcgctcaagggcgagagcgggacgatcagcgccaacctcgccggt
tcgcgcgggcgcggcttcgaactggcgacggtcgcccgcctcacccccgacagcgtcagc
ctgaccgccgacggcacgatcgaccagaagccgatccggctcgatggcccggccgtgctg
cggcgcgagcccgacgcctggcgtctcgaaccgaccaccctcggcttcggcagcggcaag
gcgacgctcgccggccgcttcggcagtgcgaccaacgaggtcaaggccggcatccaggcg
atgcccttgtcggtgctcgacatcttctatccggggctgggcctgtcgggcgtcgcgacc
ggcgacgtcgactatcggctccagcgcggcgcgcgcatccccactggccgcgtcaacctc
aagatccgtggcctgtcgcgctcgggcctggtgctgacctcgcgccccgccgatgtcgcg
ctggcgggcgtgctgaccgagaatgtcgccgccgcgcgggcggtggtgtcgagcggcggc
aaggtgatcggacgcgggcaggcgcggatcaccaacctgccggcgaccggcgcgctgccc
gaccggctgatgagcggcaacctgctcgcgcagctccgctatggcggcccggccgacacg
ctgtggcgcctgatcggagtcgagacgatcgacatatcggggccggtgtcgatcggcgcc
gacatcagcggcaccggcgccaatccggtgatccggggatcgctgcgctcgacccaggcg
cggctcgaaagcgcggtgaccggcacggtgatcaccaacatcgccgcgaccggccgcttc
aacggatcgcggctgctggtcgacaagctgtccggccagacgcggggcggcggcaccatc
gccggccgcgccgcgttcgacttcgcggcggagaagggcatcggcatggacgtctcgctc
gacgcgcagaacgcccagctcatcaaccgcgacgatatcggcgcgatcgtgaccggtccg
atcacgatccgttcggacggcggcagcggcacgatcggcggcgacgtccggctggtgcgc
ggccgcttccagctcggccgcgccgcggcggtcgcgacgatcccgcagttcgacacggtc
gagctcaaccgccccgacgacgaggacgacgtccagcggcccctgtcgtggaagctcgac
atcgacgtggattcgcgcaaccagctcgcggtcaccggcctcggcctcgacagcgaatgg
cgcggcaagctccacctcggcggcacgatcgacaatccggcgatcaacggccgggtcgac
ctggtgcgcggtggctacgagttcgccggccgccgcttcgatctcgatcgcggcgcgatc
cgtttcctcggcgaaaccccgcccgatccgctgctcgacatcaccgccaaggccaatctc
aacggcgtcagcgcgacgatcacggtcagcggcaccgggcagaagcccgagatacacttc
agcagcattcccgcgctgcccgaggacgaactgctgtcgcggctgctgttcggcacctcg
atcaccaacctgtcggcgcccgaggcgctccagctcgcggcggcggtcgggtcgctgcgc
ggcgggggcggggggctcaacccgatcaacgcggtgcgccgcgccgccgggctcgatcgc
ctgcgcatcctgcccgccgatccgacgatcggcatcggcacctcgatcgccgccggcaaa
tatatcggccggcgcacctatgtggaggtgatcagcgacgggcagggctattcggcgacg
cggatcgagttccagatcacccgctggctgtcgctgctgtcgagcatctccaccatcggc
cggcagagcgccagcgtgaaggtgtcgaaggactattag
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