Rhizorhabdus wittichii RW1: Swit_4873
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Entry
Swit_4873 CDS
T00538
Name
(GenBank) YD repeat protein
Organism
swi
Rhizorhabdus wittichii RW1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
ABQ71210
UniProt:
A0A9J9LGJ5
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Position
5368811..5373028
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AA seq
1405 aa
AA seq
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MAVAPTRLNIWKSRSSPFVIAWAALAAPAIAQSVPAPAPPIRSVIDENGVDLSRGTFNVT
TPGVSIGAGPGALSFSQTWTGSGWRDTITATLTGNLAHPVVSIGGISESFTADSAGNYTA
DQGNGASLTYYSAFNQYKYVGRDGTRISFSPVVINRMASNLGTAEIITTPDGNQTVYRFE
WANYLWRTISISNDYGYQIRFSYASNNPQFPVEFGTITKAVASNGIIDYCSETDPAPCNY
SRKWPSISFALTGDYNSGSQTVNDAMNNVTRYTYSGGKIVAIKRPGSTTDTIGIGYDANL
RVNGYNNSASNWTYTYVDAGSTRTTTRTNVAGKSIQAVTDPFNGILTSYRDENNHTTSYL
HDSLGRLTRVTAQEGNYVGYGLDARGNVSSTTYVAKGGSVPNIVTLASFPATCTVIFTCN
KPQTTTDAKGNVTNYTYDPANGNLLTVAAPAVTGGRPTTTYSYTPLSAYFKRFPDGSFSA
AAPISTLTGVTICRTAATCPGNVNENKSTYAYGTPSTPNNLLLTAESHGAGNGSLTATTN
YGYDPVGNRLTIDGPNPGSADTTRFRYDMNRQLVGIVGPDPDGAGTLKNRAQRYTYNADG
RVTLIEQGTTPGQADNDWAQFNSLQEQATGYDNAMRPYRTATIAGGIMYTLTEFSYDALG
RPDCVAVRMNQPTFGSVTPACTQVTPAGGFGRDRILKYGYDAAGQVLSVTTGYGTTLSRA
EASYTYTPNGQIASMADAKNNLTSYVYDGFDRLKVTYFPNKTGGGSTSNCALSTTDCEEL
TYDANSNIVDRRVRNGSHIVQAFDALNRLASRSLPAGSGNPNPAFTYDLVGNLLTANNSN
SSPVYSHGLTFTWDALGRKRSETSTYNGTGAIMKTMDYDLAGNRTKFAWPDLYVTYDYDN
VNEMTAARENGGSFVLASFTYDDLGRRTSLTRGNNTQTNYTYDPVSRLETIGFGGGGSGT
LITLWNYNPANEIGARVNSNDAYAWTGGVNANKSYGRNGLNQYTTVGSSSLSYDPKANLT
SINGVAYTFGTENTLTTGAGGSYWHDALQRITYLTSTSQRQDYDGDQLIGIYNSANTLVR
RYVFGPGIDEPILWYEGTGTADRRYMDADERGSIIRVTSQGGGLIRINTYDEFGVPGANN
LGRFQYTGQVWMADIGKYNYKNRLYAPEIGRFMQPDPIGYDGGANLYNYVGANPVNFTDP
MGFAPDSNNQCTAWWCTLVASGAVPGEPSGSSSGGGAPIFDPLGGASFNFQGWGALSSFV
ANSPLFMTYKPYIDLSAPAKPKPQNEARMKPETKKYLCGKLSSNEFNVPKTFRNVLTDRH
SRTNGKSNWSVPRFRQAENFLYATGQWRSPSTDGSTYPGVYIHQFSKYVSSNTSEFSWDA
LNAGLDGVDHKNDTAAELKAFCNVR
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgctcctacgcgcctgaacatctggaagtcgcgttcctctcccttcgtcatc
gcttgggcggcgttggcggctcccgctatcgcgcagtcggttccagcgcccgcgccgcca
atcaggtcggtgatcgacgagaatggtgtcgatctctcgcgcggcaccttcaacgtgacg
acgccgggcgtttcgatcggggcgggccctggtgccctttccttctcgcagacctggacc
ggatcgggatggcgggacaccataacggccacgttgaccggaaacctcgcgcatccggtg
gtgagcatcggcggtatttccgaaagtttcaccgctgacagcgctggcaattacacggca
gatcaaggcaatggcgcatccttgacctattacagtgccttcaatcagtacaaatatgtc
ggtcgggatggaactcggatatccttctcccccgttgtcatcaaccgcatggcatcgaat
ttaggaacggctgaaatcattactacgcctgatggaaatcagacggtctatcgtttcgag
tgggcgaactatctatggagaacgatttcgatatccaacgattatggatatcaaatccgt
ttcagctatgcgagcaacaatcctcagttcccagttgaatttggaacaataactaaggct
gttgcctccaacggtattatcgactattgtagtgaaaccgatccagcgccttgtaattac
tcacgaaaatggccatccatttcattcgcattaacgggcgactataattccggatcgcag
accgtcaatgacgcgatgaacaatgttacccgctatacgtatagcggtggcaagatcgtc
gccatcaagcggccgggatctactaccgacacaataggcatcggttacgatgccaatctc
cgagtgaacggttacaataattcagcctccaactggacctacacttatgtcgatgcgggt
tctacccgtacgaccacgcgcacgaacgtcgcgggtaaatccattcaggcggtgaccgat
ccgttcaacgggattctgacctcctaccgtgacgagaacaatcacacgaccagctatctc
catgatagcctggggcgcctcactcgcgtgacggcccaggagggtaattacgtcggttac
ggccttgatgcccgtggcaatgtgagttcgacgacatatgtcgccaaaggcgggtctgtg
ccgaatatcgtcacattggcgtcctttcccgccacctgtacggtgatcttcacctgcaac
aagccacagacgacgaccgacgcgaaggggaatgtaaccaactatacctatgatccggcc
aacggaaatctgctgacggtcgcggcgccggcagtaacgggcggacggccgaccaccact
tacagctacaccccgctcagtgcttatttcaaacgcttcccggacggcagcttctcggcg
gctgctcccatttcgacactgacgggcgtcactatatgccgcacggccgcgacctgtccg
ggcaatgtcaatgagaacaagtcgacctacgcctatggcacgccgagcactcccaacaac
ctgctgctgaccgcggaatcgcacggcgcaggcaatggctcgctgacggccaccaccaac
tacggctatgacccggtgggcaatcgcctgacgatcgacggacccaatcctggaagtgcc
gacacgacgcgcttccgctacgatatgaatcgccaactggtgggtatcgtcggtcctgac
ccggatggcgcgggtacgctcaagaaccgggcgcaacgctacacctacaacgccgatggg
cgagtgaccctcatcgaacagggtaccacgcctgggcaagccgataatgattgggcgcaa
ttcaacagcttgcaggagcaagcgactggctatgacaacgcgatgcgtccctatcgcacc
gctacgatagcgggcggcatcatgtatacgctgaccgaattcagctatgatgcacttggt
cggcctgattgtgtggctgtccggatgaatcagccgaccttcggttcggtgacgccggcc
tgcacccaggtcacgccggccggcggtttcgggcgcgatcggattctgaaatatggctat
gacgccgctggccaggttctcagcgtcactacgggttatggcacgacactcagccgggcg
gaagcaagctacacatataccccgaacggccagatcgcctcgatggccgatgccaagaat
aatctcaccagctatgtctatgacggtttcgatcggctgaaggttacctatttcccgaac
aagaccggtggcggctcgacctcgaattgcgctttgtcgacgacggactgtgaggaactg
acctacgatgccaacagcaacatcgtcgatcgtcgggtccgaaatgggagccacatcgtt
caggccttcgatgccttgaatcggttggcgtcgcgcagcttgcctgcgggttccggcaat
cccaacccggccttcacatatgatctggtcggcaatctgctgacggcgaacaattccaac
agcagcccggtctattcccatggattgaccttcacctgggacgcgctcggccggaagcgc
agcgagacttcgacctataatggtaccggcgccatcatgaagacgatggactatgatctt
gcaggaaaccggaccaaattcgcgtggcctgacctctacgttacctatgactatgacaac
gtcaatgagatgacggccgcccgtgagaatggcggctcctttgtcctggcaagcttcact
tacgatgatcttggccgccgtaccagcctgacccgcggcaacaacactcagaccaactac
acttatgacccggtttctcggctcgagacgatcggtttcggaggaggtggttcaggcacg
ctgatcacattgtggaactataatcccgctaatgaaatcggggcgcgcgtcaacagcaac
gatgcctatgcctggaccggcggtgtcaacgccaacaaatcctacgggcgcaacggcctc
aaccaatataccaccgttggttcatcgagcttgtcctatgatcccaaggcgaacctgacc
tcgatcaatggcgtggcctatacctttggcaccgagaacacgctgaccaccggcgcgggc
ggctcctattggcatgacgccctgcagcggatcacttatttgacctcgaccagtcagcgc
caggattatgacggtgatcagctcattggtatctacaacagcgccaacactctcgttcgc
cgttatgtgttcgggcccggcatcgatgagccgatcctgtggtatgaagggacgggcacc
gctgaccgacgctatatggacgctgacgagcgaggttcgatcattcgtgtaaccagccag
ggtggcgggcttatacggatcaacacgtatgacgagttcggcgtgcctggtgcgaacaat
ctcggcagattccaatataccggtcaggtttggatggcggatatcggtaagtataattac
aaaaatcgtctctatgccccggagatcgggcgcttcatgcagccggacccgatcggctat
gatggaggagcgaacctgtacaattatgtgggagcgaatccggtcaatttcactgacccg
atgggtttcgctcctgattctaataatcaatgcacggcttggtggtgtacccttgttgcg
tcaggcgcagtgcctggcgagccgtcaggctcatcgagtggaggcggagctccgatcttt
gaccccttgggtggggcgagcttcaattttcaaggttggggcgccttgtcttcttttgtt
gcaaactcgccactatttatgacgtataaaccctatattgatctcagcgcgccggccaag
ccgaaaccgcaaaatgaagcgcgcatgaaaccggaaaccaagaagtacctttgcgggaaa
ctgagctccaacgaattcaatgttcctaagacatttcgcaatgttctaacggacaggcat
agtcgaacgaatggaaaaagtaactggagtgtgccgcgatttagacaagctgaaaatttt
ctttatgctacggggcaatggcgctctccttcaacggatggttcgacttatccaggtgtt
tatattcatcaattttctaagtatgtttcttctaatacctccgaattctcctgggatgct
ttgaatgcaggtctggatggcgttgaccataagaacgacaccgctgccgagctaaaggcg
ttttgcaatgtcagataa
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