Rhizorhabdus wittichii RW1: Swit_4894
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Entry
Swit_4894 CDS
T00538
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
swi
Rhizorhabdus wittichii RW1
Brite
KEGG Orthology (KO) [BR:
swi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
swi02000
]
Swit_4894
Transporters [BR:
swi02000
]
Other transporters
Pores ion channels [TC:
1
]
Swit_4894
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABQ71516
UniProt:
A0A9J9HGS3
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Position
pSWIT02:complement(6965..9391)
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AA seq
808 aa
AA seq
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MKARMFIGASLVALTVSSPVFAQAGAKTEVSEPSQNEGIQDIVVTAQRREESTQKAALSI
VAFGGDQLRSAGVTDAGSLAKLAPGLQISGGTSSMIYIRGVGDYGVTATSNSAIATSLDG
VVISRPQDISGNFFDLQRVEVLKGPQGTLYGRNASGGAVNLITVAPVLGEFSGYAEVNLG
DYDQYGIEGAFNVPASDDGAFRLSYSLNRRNGYLSNGGDDDDREAVRFQARFKSGRLSLR
AQLNYLHRGGVGTGFSVLGRLPGMSPWTGNTDPAAGAAYIAAATAQFNGALAAGCNPAPN
GNCPPPPSLIANPSDSRLFQDIETFGGHMQLDYDLDWATLTVIPGYRRSTLAFSSQPSFM
YNVGGVYDSAGNRSKGELSDQYTLEARLGGESGVLKWVAGGYYLKEKQTNDFTIQAGPIL
NQRTTGALTTQAFAAFGQLTFNVSDRFRVTGGIRYTSDKRVSDRLAQAAISPSVIIPDPV
ISGLPPIPCLPDVPVPGANPPGTNCRLLAADPTIYRSAITFNKVTWKAGIEFDVATASMF
YADVSTGFKAGGFSQALSLTDPTKLQSYAPETITAYTVGLKNRFLNNRLQINLEAFYWDY
KNLQLSAQGLDGAGLVTILTQNAGKSTIKGASVSLEARPWHGMTLHGAVDYVDSKYDSFV
ITQPTQFVPPGRTGCIQTYSGGFATVDCSGFPLVRSPKWSGSAGFTQSFDMANGGTVALG
GDLSFASSAYLFTEFLPIQKQGSYANLSASLTYTAAGDRWFISGYVRNITDEVIYTGGSG
QSSAFVQGWVSSSIAPPRTWGVRAGLKF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgtatgtttatcggcgcaagccttgtggctttgactgtttcgtcaccggtg
tttgcacaggcaggtgcgaaaaccgaagtcagtgagccgagccaaaatgaaggcattcag
gatatcgtcgtcactgcacagcgccgcgaggaaagtacccagaaggcagcgctgtccatt
gtcgcgtttggcggcgatcagttgcgttcagccggtgtcacggatgcaggcagcttggcg
aagcttgccccgggtctccagatttctggaggcacgagcagtatgatttatattcgtggc
gttggcgattacggtgtcacggcaacttcgaattcagctatagcgaccagcctcgatggc
gttgtcatttctcgcccccaagacatttctggcaacttctttgatctgcagcgtgtcgaa
gtgttgaagggaccgcaaggaacgctctacggcagaaatgcgagcggcggtgccgtcaat
ctgattactgtggcccccgtccttggtgaattttcgggctatgctgaagtaaacctgggc
gattatgaccagtatggcattgaaggcgcctttaacgttcctgcgagcgatgatggcgca
tttcgactgtcctacagtttaaaccgcagaaacggctatctctcgaacggtggggacgac
gatgatcgtgaggcggtgcggttccaggccaggttcaaatccggtcggctgtcgctgcgc
gcgcagctcaattatctccatcgcggtggggtcggtacgggtttttcggttctgggccgg
ttgcctggaatgtcgccgtggacaggcaacaccgatcctgctgccggcgcggcgtatatt
gccgcagccaccgctcagttcaatggcgcactggccgcgggatgcaacccggcacctaat
ggtaactgcccgcctccgccctccttgattgcgaatccttccgacagtcggctattccag
gatatcgagacgtttggtgggcatatgcagctcgattacgatttggattgggcgacgctg
actgtcatacccggctatcgtcgctctaccttggcattctcgtcgcagccatcctttatg
tataacgtcggcggcgtttatgactctgctggaaataggtccaaaggcgaattatctgac
caatatactttggaagcgcgcttgggtggagagagtggcgtcctgaaatgggtcgccggc
ggttactatttaaaggaaaagcagacgaacgacttcaccattcaagctgggccgatcctg
aaccagcggacgacaggtgcgttgaccacgcaagcgtttgctgccttcggtcagttgacc
ttcaacgtttcagatcgattccgagtgacgggcggaattcgctatactagcgacaagcgt
gtgtcggatagattggcccaagctgcgatctctccatcggtcattattccagacccagtt
atctccggtctaccgccgatcccttgccttccggacgtaccagttccgggggccaaccct
cctggaacgaactgtcgattgctggctgctgacccaaccatctacagaagtgcaatcact
ttcaataaggtaacgtggaaggccgggatcgaattcgatgttgcgactgcgagcatgttc
tatgccgatgtcagcactggtttcaaggcgggaggatttagtcaagcgcttagcttgact
gacccgaccaagttgcaatcctatgccccggaaacaatcactgcttataccgtgggactg
aagaatcggttcctaaacaataggctgcaaatcaaccttgaggccttctattgggattat
aagaatctgcagctttctgcacagggccttgatggagccggcctcgttacgattctgacg
cagaatgcgggcaagtcgacgatcaagggcgcgagcgtaagtcttgaagcaaggccgtgg
cacggcatgacgcttcacggagcggtggattatgttgattcgaagtatgatagcttcgtg
attacccagccgacgcagtttgtgccaccgggccggactggctgcatccagacctattct
ggcggatttgcgactgtggattgctccggcttcccacttgtgcgctcaccgaaatggtca
ggatcggccgggttcacgcagtcatttgacatggcgaatggcggaactgttgcccttggt
ggtgacctgtcgtttgccagcagtgcctaccttttcaccgagttccttcccattcaaaag
cagggctcctacgcaaatctctccgcttcgttgacctatacggccgctggtgatcgctgg
ttcattagtggatatgtccgcaacattactgatgaagtgatctatacaggcggcagtggg
cagagttccgccttcgtccagggatgggtatcgagtagtatagcacctccacgcacttgg
ggtgtacgcgctggtctcaagttctaa
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