Rhizorhabdus wittichii RW1: Swit_4913
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Entry
Swit_4913 CDS
T00538
Name
(GenBank) Integrase, catalytic region
Organism
swi
Rhizorhabdus wittichii RW1
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_7
HTH_23
HTH_29
rve_3
HTH_17
RF3_C
Sigma70_r4_2
Peptidase_M29
Motif
Other DBs
NCBI-ProteinID:
ABQ71534
UniProt:
A0A9J9HH32
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Position
pSWIT02:25042..26328
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AA seq
428 aa
AA seq
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MTTVITEFPARTLAVQGEEMLQPDEVAAMVRLHELGWGAKRLSKEFGCARNTVRRYLRAG
GVVPFAKPARKSAFDGLDDWLRERFFRHGGNADVVRQELASEHGIVIGLRSVELRVQRWR
RELKAQKRATVRFETRPGHQLQIDFGESKVWIGDERVRVHLFVATLGYSRRMHIRPSIRE
RQVDWFEGMEGAFLRFGGVPAEILFDNARALVEHHDAATREVRFNGRLHAFARYWGFSPR
ACAPYRARTKGKDERGVGYVKRNAIAGRRFASWGAFVAHLEQWNREIADVRVHGTTGELP
LVRFADEAAALRPLGGRAPFGQLRDLVRKVRPDCAIDLDTNSYSVPWRLVGETVQVVVLA
GRVIVRHAGEVVADHPVCDGRRQRVVDRAHLAGLVGTGPFRVTASPPTPPPALLRPLAEY
EAVVGGGW
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgtgatcacagagtttcctgcacggacattggctgtgcagggagaggagatg
cttcaacccgacgaggtggccgcgatggtgcggttgcatgagcttggttggggagccaag
cggctgtcgaaggagttcggctgcgcgcgcaacacggtacggcgctatctccgcgccggc
ggcgttgtaccattcgcgaagccggcgcgtaaatcggcgttcgacgggctcgacgactgg
ctgcgcgagcgcttttttcggcatggcggcaatgccgatgtcgtgcgccaggagctggcg
agcgagcacgggatcgtgatcggcctgcggtcggtcgagcttcgggttcagcgctggcga
cgtgagctgaaggcgcagaagcgggccacagtgcgcttcgagacgcggccggggcatcag
ctacaaatcgactttggcgagtccaaagtgtggatcggcgacgagcgtgtgcgggtgcat
ctgttcgtggcgacgctgggctactcgcgccggatgcacatccgcccctcgatccgcgag
cgccaggtggactggttcgaaggcatggaaggcgcgttcctgcggttcggcggcgtgccg
gcggaaatcctgttcgacaacgccagggcgctggtcgagcatcatgacgcggcgacgcgg
gaagtgcggttcaacggccggctccacgcctttgcccgctattggggcttctcgccgaga
gcttgcgcgccgtaccgggcgcgcaccaagggcaaggacgaacgcggcgtcgggtacgtg
aagcgcaacgccattgccggccgccgcttcgccagctggggcgccttcgtcgcgcacctc
gagcaatggaaccgcgagattgccgacgtacgtgtgcacgggacgaccggcgaactgccg
ctcgtccgcttcgccgacgaagccgccgccctgcgtccgctcggtggccgtgctccgttc
ggccagctgcgcgacctggttcgcaaggtgcggcccgactgtgccatcgacctcgacacc
aacagctactcggtaccctggcgcctggtcggcgagaccgtgcaggtcgtggtcctcgcc
ggtcgcgtcatcgtgcgccatgctggcgaggtcgtggccgaccatcccgtgtgcgacggg
cgtcggcagcgggtggtcgatcgggctcatcttgcgggtctggtgggcaccggtcccttc
cgcgtgacggcatcgccgccgacgccaccgccggccttgctgcgccccctcgccgagtat
gaagccgtggtcggagggggttggtga
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