KEGG   Rhizorhabdus wittichii RW1: Swit_5002
Entry
Swit_5002         CDS       T00538                                 
Name
(GenBank) conjugation TrbI family protein
  KO
K03195  type IV secretion system protein VirB10
Organism
swi  Rhizorhabdus wittichii RW1
Pathway
swi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:swi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Swit_5002
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:swi02044]
    Swit_5002
Secretion system [BR:swi02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Swit_5002
SSDB
Motif
Pfam: TrbI
Other DBs
NCBI-ProteinID: ABQ71618
UniProt: A0A9J9HGW8
LinkDB
Position
pSWIT02:complement(119332..120549)
AA seq 405 aa
MDESAAEAPRRPQGDPTPERDEIIRERGIDPIGGMTPAKRNTALIFAGTAMVLGILWVNS
GPSKTGSSLMGKPEAMAKRPDLAARETVAYDAVAAKPKPLGAVGADPNAPVLNPPPTVGP
DGQIVPAIQPGAQPAAAPQNTRQNLADQARRSTLIAYGGREALQAPGGSNGAGSETGNAG
IAGDGSTDPAVRSSPNALDALRQSSAVGEARASMLPNRNYLVTAGTLIPCILQTAMNSAQ
PGYTSCLIPRDVYSENGRVVLMEKGTKVLGEYHGGIQQGQNRLFVLWTRAVTPQGVRIDL
ASPGSDALGRAGIAGSVDTFFWARFGSALLLSLVDDAAYIAGQSVSGGSNNFNNTTRTPS
EGASIALQNSINIRPVLKKNQGEEVGIFVAKDFNFADVYNLELRR
NT seq 1218 nt   +upstreamnt  +downstreamnt
atggacgagtctgcggccgaggcccctcgtcgcccgcaaggcgacccaacacctgaacgt
gatgaaatcatccgcgaacgcggcatcgatccgatcggtgggatgacacccgcaaagcgg
aataccgcccttattttcgccgggacggcgatggtgctcggcattttgtgggtgaactcg
ggaccgagcaagaccggctcgagtttgatggggaagcccgaggcgatggccaaaaggccg
gatctcgcggcgcgcgaaacggtcgcttatgatgctgtcgcagcgaaacccaagccgctc
ggcgccgtgggcgccgatcccaatgcgcctgtcctcaaccctccgccgaccgttggccct
gacggacagatcgtgccggcaatacaacccggagcgcagccagcggcggcaccgcagaac
acgcgccagaacctggccgatcaggcccgtcgttcaacattgatcgcttatggcggccgc
gaggcgctgcaggctccggggggttccaacggtgctggctccgaaaccggcaatgcgggc
atagctggcgacggctcgaccgatccagccgtccgcagttcgcccaatgcgctcgatgcg
cttcgtcagagttcggccgttggcgaggcacgcgcctcgatgctgcccaatcgcaactat
ctcgtcaccgccggcacgctgatcccctgcattcttcagaccgccatgaattcggcgcag
ccaggttacacctcctgcctcattccgcgcgacgtctattcggagaacggccgcgtcgtg
ctgatggagaagggcaccaaagtgctcggcgaatatcatggcggcatccagcaagggcag
aaccggctctttgtgctctggacccgggccgtcacgccgcagggcgtgcgcatcgacctg
gcttcgccgggctccgacgcgcttgggcgggccggcattgccggatcggtcgacaccttc
ttctgggcaaggtttggcagcgcgctgttgctctcgctggtcgatgatgccgcctatatc
gccggacagtcggtctcgggcggcagcaacaatttcaacaacacgacgcgcacgccgagc
gagggggcgagcatcgcgctccagaacagcatcaacatccgtccggtcctgaaaaagaac
cagggcgaggaagtcggcatcttcgtcgccaaggactttaacttcgccgacgtctacaat
ctcgagctgcggcgctga

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